RNA–Protein interactions for RNA: ENST00000490803.5

PDE9A-225, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best)

Gene PDE9A, Length 1,865 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-225ENST00000490803 NISCHQ9Y2I1 1504 aa41.5■■■■■ 4.23
PDE9A-225ENST00000490803 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
PDE9A-225ENST00000490803 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
PDE9A-225ENST00000490803 ABCC9O60706 1549 aa34.66■■■■□ 3.14
PDE9A-225ENST00000490803 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
PDE9A-225ENST00000490803 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
PDE9A-225ENST00000490803 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
PDE9A-225ENST00000490803 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
PDE9A-225ENST00000490803 NACADO15069 1562 aa33.95■■■■□ 3.03
PDE9A-225ENST00000490803 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
PDE9A-225ENST00000490803 SCRIBQ14160 1630 aa33.4■■■□□ 2.94
PDE9A-225ENST00000490803 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
PDE9A-225ENST00000490803 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
PDE9A-225ENST00000490803 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.84
PDE9A-225ENST00000490803 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.8
PDE9A-225ENST00000490803 RSF1Q96T23 1441 aaPredicted RBP32.28■■■□□ 2.76
PDE9A-225ENST00000490803 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.75
PDE9A-225ENST00000490803 CHIC1Q5VXU3 224 aa32.25■■■□□ 2.75
PDE9A-225ENST00000490803 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
PDE9A-225ENST00000490803 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
PDE9A-225ENST00000490803 SMARCA4P51532 1647 aa32.01■■■□□ 2.72
PDE9A-225ENST00000490803 WIZO95785 1651 aa31.81■■■□□ 2.68
PDE9A-225ENST00000490803 EIF4G1Q04637 1599 aaKnown RBP31.78■■■□□ 2.68
PDE9A-225ENST00000490803 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
PDE9A-225ENST00000490803 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
PDE9A-225ENST00000490803 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
PDE9A-225ENST00000490803 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
PDE9A-225ENST00000490803 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
PDE9A-225ENST00000490803 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
PDE9A-225ENST00000490803 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
PDE9A-225ENST00000490803 HMGXB3Q12766 1538 aa31.27■■■□□ 2.6
PDE9A-225ENST00000490803 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
PDE9A-225ENST00000490803 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
PDE9A-225ENST00000490803 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.56
PDE9A-225ENST00000490803 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
PDE9A-225ENST00000490803 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
PDE9A-225ENST00000490803 FAM9AQ8IZU1 332 aaPredicted RBP30.64■■■□□ 2.5
PDE9A-225ENST00000490803 CFTRP13569 1480 aa30.52■■■□□ 2.48
PDE9A-225ENST00000490803 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
PDE9A-225ENST00000490803 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
PDE9A-225ENST00000490803 PCGF6Q9BYE7 350 aa30.45■■■□□ 2.47
PDE9A-225ENST00000490803 EEA1Q15075 1411 aa30.4■■■□□ 2.46
PDE9A-225ENST00000490803 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
PDE9A-225ENST00000490803 NESP48681 1621 aa30.34■■■□□ 2.45
PDE9A-225ENST00000490803 LAMC3Q9Y6N6 1575 aa30.34■■■□□ 2.45
PDE9A-225ENST00000490803 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
PDE9A-225ENST00000490803 HRCP23327 699 aa30.24■■■□□ 2.43
PDE9A-225ENST00000490803 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
PDE9A-225ENST00000490803 SOGA1O94964 1423 aa30.23■■■□□ 2.43
PDE9A-225ENST00000490803 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
PDE9A-225ENST00000490803 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
PDE9A-225ENST00000490803 CSRNP3Q8WYN3 585 aa30.1■■■□□ 2.41
PDE9A-225ENST00000490803 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
PDE9A-225ENST00000490803 KIF21AQ7Z4S6 1674 aa30.06■■■□□ 2.4
PDE9A-225ENST00000490803 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
PDE9A-225ENST00000490803 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
PDE9A-225ENST00000490803 TNIKQ9UKE5 1360 aa30.05■■■□□ 2.4
PDE9A-225ENST00000490803 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
PDE9A-225ENST00000490803 CUX1P39880 1505 aa30■■■□□ 2.39
PDE9A-225ENST00000490803 GOLGA3Q08378 1498 aa30■■■□□ 2.39
PDE9A-225ENST00000490803 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
PDE9A-225ENST00000490803 KIF21BO75037 1637 aa29.96■■■□□ 2.39
PDE9A-225ENST00000490803 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
PDE9A-225ENST00000490803 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
PDE9A-225ENST00000490803 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
PDE9A-225ENST00000490803 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
PDE9A-225ENST00000490803 UBTFP17480 764 aaKnown RBP29.78■■■□□ 2.36
PDE9A-225ENST00000490803 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
PDE9A-225ENST00000490803 MRC2Q9UBG0 1479 aa29.71■■■□□ 2.35
PDE9A-225ENST00000490803 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.35
PDE9A-225ENST00000490803 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
PDE9A-225ENST00000490803 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
PDE9A-225ENST00000490803 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
PDE9A-225ENST00000490803 WDR62O43379 1518 aa29.6■■■□□ 2.33
PDE9A-225ENST00000490803 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
PDE9A-225ENST00000490803 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
PDE9A-225ENST00000490803 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
PDE9A-225ENST00000490803 ZEB1P37275 1124 aaPredicted RBP29.54■■■□□ 2.32
PDE9A-225ENST00000490803 CLIP1P30622 1438 aa29.52■■■□□ 2.32
PDE9A-225ENST00000490803 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
PDE9A-225ENST00000490803 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
PDE9A-225ENST00000490803 WDR97A6NE52 1622 aa29.47■■■□□ 2.31
PDE9A-225ENST00000490803 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
PDE9A-225ENST00000490803 CUX2O14529 1486 aa29.43■■■□□ 2.3
PDE9A-225ENST00000490803 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
PDE9A-225ENST00000490803 VPS8Q8N3P4 1428 aa29.39■■■□□ 2.3
PDE9A-225ENST00000490803 IFT140Q96RY7 1462 aa29.28■■■□□ 2.28
PDE9A-225ENST00000490803 ABCA5Q8WWZ7 1642 aa29.28■■■□□ 2.28
PDE9A-225ENST00000490803 TDRD9Q8NDG6 1382 aaKnown RBP29.23■■■□□ 2.27
PDE9A-225ENST00000490803 IGF1RP08069 1367 aa29.19■■■□□ 2.26
PDE9A-225ENST00000490803 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
PDE9A-225ENST00000490803 ZNF608Q9ULD9 1512 aaPredicted RBP29.15■■■□□ 2.26
PDE9A-225ENST00000490803 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
PDE9A-225ENST00000490803 ARAP1Q96P48 1450 aa29.13■■■□□ 2.25
PDE9A-225ENST00000490803 APLP2Q06481 763 aa29.12■■■□□ 2.25
PDE9A-225ENST00000490803 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.25
PDE9A-225ENST00000490803 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
PDE9A-225ENST00000490803 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
PDE9A-225ENST00000490803 CUL7Q14999 1698 aa29.08■■■□□ 2.25
PDE9A-225ENST00000490803 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms