RNA–Protein interactions for RNA: ENST00000470987.5

PDE9A-221, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best)

Gene PDE9A, Length 1,954 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-221ENST00000470987 NISCHQ9Y2I1 1504 aa39.05■■■■□ 3.84
PDE9A-221ENST00000470987 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
PDE9A-221ENST00000470987 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.87
PDE9A-221ENST00000470987 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
PDE9A-221ENST00000470987 DCAF1Q9Y4B6 1507 aa32.32■■■□□ 2.76
PDE9A-221ENST00000470987 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
PDE9A-221ENST00000470987 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
PDE9A-221ENST00000470987 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
PDE9A-221ENST00000470987 ABCC9O60706 1549 aa31.06■■■□□ 2.56
PDE9A-221ENST00000470987 NACADO15069 1562 aa31.05■■■□□ 2.56
PDE9A-221ENST00000470987 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
PDE9A-221ENST00000470987 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
PDE9A-221ENST00000470987 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
PDE9A-221ENST00000470987 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
PDE9A-221ENST00000470987 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
PDE9A-221ENST00000470987 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.42
PDE9A-221ENST00000470987 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
PDE9A-221ENST00000470987 WIZO95785 1651 aa29.99■■■□□ 2.39
PDE9A-221ENST00000470987 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
PDE9A-221ENST00000470987 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
PDE9A-221ENST00000470987 LOC105371045A0A1W2PR82 267 aa29.82■■■□□ 2.36
PDE9A-221ENST00000470987 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
PDE9A-221ENST00000470987 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
PDE9A-221ENST00000470987 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.33
PDE9A-221ENST00000470987 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
PDE9A-221ENST00000470987 HRCP23327 699 aa29.5■■■□□ 2.31
PDE9A-221ENST00000470987 PCGF6Q9BYE7 350 aa29.5■■■□□ 2.31
PDE9A-221ENST00000470987 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
PDE9A-221ENST00000470987 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.3
PDE9A-221ENST00000470987 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
PDE9A-221ENST00000470987 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.28
PDE9A-221ENST00000470987 TRIM26Q12899 539 aaPredicted RBP29.3■■■□□ 2.28
PDE9A-221ENST00000470987 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
PDE9A-221ENST00000470987 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
PDE9A-221ENST00000470987 ATAD2BQ9ULI0 1458 aa29.08■■■□□ 2.25
PDE9A-221ENST00000470987 EEA1Q15075 1411 aa28.99■■■□□ 2.23
PDE9A-221ENST00000470987 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.23
PDE9A-221ENST00000470987 WRNQ14191 1432 aaPredicted RBP eCLIP28.85■■■□□ 2.21
PDE9A-221ENST00000470987 SOGA1O94964 1423 aa28.8■■■□□ 2.2
PDE9A-221ENST00000470987 EHMT2Q96KQ7 1210 aa28.79■■■□□ 2.2
PDE9A-221ENST00000470987 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
PDE9A-221ENST00000470987 CSRNP3Q8WYN3 585 aa28.72■■■□□ 2.19
PDE9A-221ENST00000470987 HMGXB3Q12766 1538 aa28.7■■■□□ 2.19
PDE9A-221ENST00000470987 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
PDE9A-221ENST00000470987 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
PDE9A-221ENST00000470987 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
PDE9A-221ENST00000470987 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
PDE9A-221ENST00000470987 CEP162Q5TB80 1403 aa28.61■■■□□ 2.17
PDE9A-221ENST00000470987 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
PDE9A-221ENST00000470987 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
PDE9A-221ENST00000470987 KIF21BO75037 1637 aa28.52■■■□□ 2.16
PDE9A-221ENST00000470987 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
PDE9A-221ENST00000470987 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
PDE9A-221ENST00000470987 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
PDE9A-221ENST00000470987 UBTFP17480 764 aaKnown RBP28.41■■■□□ 2.14
PDE9A-221ENST00000470987 CFTRP13569 1480 aa28.31■■■□□ 2.12
PDE9A-221ENST00000470987 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
PDE9A-221ENST00000470987 CLIP1P30622 1438 aa28.17■■■□□ 2.1
PDE9A-221ENST00000470987 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
PDE9A-221ENST00000470987 CUX1P39880 1505 aa28.16■■■□□ 2.1
PDE9A-221ENST00000470987 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
PDE9A-221ENST00000470987 PRXQ9BXM0 1461 aa28.11■■■□□ 2.09
PDE9A-221ENST00000470987 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.09
PDE9A-221ENST00000470987 KIF27Q86VH2 1401 aa28.04■■■□□ 2.08
PDE9A-221ENST00000470987 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
PDE9A-221ENST00000470987 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
PDE9A-221ENST00000470987 CCER1Q8TC90 406 aaPredicted RBP27.93■■■□□ 2.06
PDE9A-221ENST00000470987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
PDE9A-221ENST00000470987 TTBK1Q5TCY1 1321 aaPredicted RBP27.84■■■□□ 2.05
PDE9A-221ENST00000470987 APLP2Q06481 763 aa27.82■■■□□ 2.04
PDE9A-221ENST00000470987 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
PDE9A-221ENST00000470987 CUX2O14529 1486 aa27.71■■■□□ 2.03
PDE9A-221ENST00000470987 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
PDE9A-221ENST00000470987 IGF1RP08069 1367 aa27.7■■■□□ 2.03
PDE9A-221ENST00000470987 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
PDE9A-221ENST00000470987 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
PDE9A-221ENST00000470987 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
PDE9A-221ENST00000470987 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
PDE9A-221ENST00000470987 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
PDE9A-221ENST00000470987 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
PDE9A-221ENST00000470987 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
PDE9A-221ENST00000470987 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
PDE9A-221ENST00000470987 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
PDE9A-221ENST00000470987 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
PDE9A-221ENST00000470987 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
PDE9A-221ENST00000470987 RRBP1Q9P2E9 1410 aaKnown RBP27.43■■□□□ 1.98
PDE9A-221ENST00000470987 NESP48681 1621 aa27.4■■□□□ 1.98
PDE9A-221ENST00000470987 KANK4Q5T7N3 995 aaPredicted RBP27.4■■□□□ 1.98
PDE9A-221ENST00000470987 CUL7Q14999 1698 aa27.37■■□□□ 1.97
PDE9A-221ENST00000470987 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
PDE9A-221ENST00000470987 CLSPNQ9HAW4 1339 aa27.34■■□□□ 1.97
PDE9A-221ENST00000470987 FHAD1B1AJZ9 1412 aa27.31■■□□□ 1.96
PDE9A-221ENST00000470987 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
PDE9A-221ENST00000470987 TIAM1Q13009 1591 aa27.29■■□□□ 1.96
PDE9A-221ENST00000470987 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
PDE9A-221ENST00000470987 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
PDE9A-221ENST00000470987 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
PDE9A-221ENST00000470987 CCNB3Q8WWL7 1395 aa27.24■■□□□ 1.95
PDE9A-221ENST00000470987 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
PDE9A-221ENST00000470987 ZNF316A6NFI3 1004 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms