Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.32■■■□□ 2.28
PAF1Q8N7H5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
PAF1Q8N7H5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.31■■■□□ 2.28
PAF1Q8N7H5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.29■■■□□ 2.28
PAF1Q8N7H5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PAF1Q8N7H5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PAF1Q8N7H5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PAF1Q8N7H5 AC145285.7-201ENST00000614819 1539 ntBASIC29.2■■■□□ 2.26
PAF1Q8N7H5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.19■■■□□ 2.26
PAF1Q8N7H5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PAF1Q8N7H5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
PAF1Q8N7H5 AP002365.1-201ENST00000603448 772 ntBASIC29.14■■■□□ 2.26
PAF1Q8N7H5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.12■■■□□ 2.25
PAF1Q8N7H5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.1■■■□□ 2.25
PAF1Q8N7H5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
PAF1Q8N7H5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PAF1Q8N7H5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.09■■■□□ 2.25
PAF1Q8N7H5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.08■■■□□ 2.25
PAF1Q8N7H5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PAF1Q8N7H5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PAF1Q8N7H5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
PAF1Q8N7H5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.04■■■□□ 2.24
PAF1Q8N7H5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PAF1Q8N7H5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
PAF1Q8N7H5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.23
PAF1Q8N7H5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PAF1Q8N7H5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29■■■□□ 2.23
PAF1Q8N7H5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PAF1Q8N7H5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
PAF1Q8N7H5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.98■■■□□ 2.23
PAF1Q8N7H5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.96■■■□□ 2.23
PAF1Q8N7H5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.96■■■□□ 2.23
PAF1Q8N7H5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PAF1Q8N7H5 DYNLL1-208ENST00000550178 581 ntBASIC28.96■■■□□ 2.23
PAF1Q8N7H5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.94■■■□□ 2.22
PAF1Q8N7H5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
PAF1Q8N7H5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PAF1Q8N7H5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PAF1Q8N7H5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.9■■■□□ 2.22
PAF1Q8N7H5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PAF1Q8N7H5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PAF1Q8N7H5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.87■■■□□ 2.21
PAF1Q8N7H5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.86■■■□□ 2.21
PAF1Q8N7H5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.85■■■□□ 2.21
PAF1Q8N7H5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.82■■■□□ 2.2
PAF1Q8N7H5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.82■■■□□ 2.2
PAF1Q8N7H5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.81■■■□□ 2.2
PAF1Q8N7H5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
PAF1Q8N7H5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
PAF1Q8N7H5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
PAF1Q8N7H5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PAF1Q8N7H5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PAF1Q8N7H5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PAF1Q8N7H5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.7■■■□□ 2.18
PAF1Q8N7H5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PAF1Q8N7H5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PAF1Q8N7H5 AL031258.1-201ENST00000623562 325 ntBASIC28.68■■■□□ 2.18
PAF1Q8N7H5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PAF1Q8N7H5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PAF1Q8N7H5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PAF1Q8N7H5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PAF1Q8N7H5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.61■■■□□ 2.17
PAF1Q8N7H5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
PAF1Q8N7H5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PAF1Q8N7H5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
PAF1Q8N7H5 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.55■■■□□ 2.16
PAF1Q8N7H5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PAF1Q8N7H5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
PAF1Q8N7H5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.53■■■□□ 2.16
PAF1Q8N7H5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.53■■■□□ 2.16
PAF1Q8N7H5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PAF1Q8N7H5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.5■■■□□ 2.15
PAF1Q8N7H5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.5■■■□□ 2.15
PAF1Q8N7H5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PAF1Q8N7H5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PAF1Q8N7H5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.48■■■□□ 2.15
PAF1Q8N7H5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PAF1Q8N7H5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.46■■■□□ 2.15
PAF1Q8N7H5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PAF1Q8N7H5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
PAF1Q8N7H5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.45■■■□□ 2.14
PAF1Q8N7H5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.42■■■□□ 2.14
PAF1Q8N7H5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PAF1Q8N7H5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.4■■■□□ 2.14
PAF1Q8N7H5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
PAF1Q8N7H5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PAF1Q8N7H5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
PAF1Q8N7H5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PAF1Q8N7H5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.32■■■□□ 2.12
PAF1Q8N7H5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PAF1Q8N7H5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PAF1Q8N7H5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.3■■■□□ 2.12
PAF1Q8N7H5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PAF1Q8N7H5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PAF1Q8N7H5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms