Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA10Q71F78 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA10Q71F78 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LCA10Q71F78 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LCA10Q71F78 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
LCA10Q71F78 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LCA10Q71F78 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LCA10Q71F78 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCA10Q71F78 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCA10Q71F78 AC135731.1-201ENST00000569415 2548 ntBASIC15.43■□□□□ 0.06
LCA10Q71F78 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCA10Q71F78 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCA10Q71F78 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LCA10Q71F78 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCA10Q71F78 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LCA10Q71F78 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC15.38■□□□□ 0.05
LCA10Q71F78 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LCA10Q71F78 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LCA10Q71F78 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCA10Q71F78 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCA10Q71F78 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCA10Q71F78 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.31■□□□□ 0.04
LCA10Q71F78 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCA10Q71F78 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC15.28■□□□□ 0.04
LCA10Q71F78 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCA10Q71F78 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCA10Q71F78 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCA10Q71F78 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.26■□□□□ 0.03
LCA10Q71F78 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCA10Q71F78 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCA10Q71F78 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCA10Q71F78 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCA10Q71F78 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCA10Q71F78 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC15.22■□□□□ 0.03
LCA10Q71F78 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LCA10Q71F78 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC15.22■□□□□ 0.03
LCA10Q71F78 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LCA10Q71F78 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCA10Q71F78 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCA10Q71F78 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCA10Q71F78 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.2■□□□□ 0.02
LCA10Q71F78 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LCA10Q71F78 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCA10Q71F78 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCA10Q71F78 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCA10Q71F78 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC15.17■□□□□ 0.02
LCA10Q71F78 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LCA10Q71F78 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
LCA10Q71F78 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCA10Q71F78 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCA10Q71F78 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCA10Q71F78 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCA10Q71F78 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.11■□□□□ 0.01
LCA10Q71F78 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCA10Q71F78 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCA10Q71F78 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCA10Q71F78 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCA10Q71F78 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC15.07■□□□□ 0
LCA10Q71F78 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCA10Q71F78 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LCA10Q71F78 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LCA10Q71F78 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
LCA10Q71F78 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC15.04■□□□□ -0
LCA10Q71F78 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC15.03■□□□□ -0
LCA10Q71F78 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCA10Q71F78 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LCA10Q71F78 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCA10Q71F78 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCA10Q71F78 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.01□□□□□ -0.01
LCA10Q71F78 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCA10Q71F78 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCA10Q71F78 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCA10Q71F78 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC15.01□□□□□ -0.01
LCA10Q71F78 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LCA10Q71F78 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LCA10Q71F78 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCA10Q71F78 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCA10Q71F78 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCA10Q71F78 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LCA10Q71F78 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LCA10Q71F78 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC14.97□□□□□ -0.01
LCA10Q71F78 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LCA10Q71F78 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LCA10Q71F78 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LCA10Q71F78 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LCA10Q71F78 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LCA10Q71F78 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LCA10Q71F78 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC14.94□□□□□ -0.02
LCA10Q71F78 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LCA10Q71F78 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC14.94□□□□□ -0.02
LCA10Q71F78 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LCA10Q71F78 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LCA10Q71F78 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCA10Q71F78 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCA10Q71F78 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCA10Q71F78 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LCA10Q71F78 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCA10Q71F78 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LCA10Q71F78 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LCA10Q71F78 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 367.2 ms