Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
NFX1Q12986 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NFX1Q12986 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.11■■■□□ 2.73
NFX1Q12986 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
NFX1Q12986 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
NFX1Q12986 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NFX1Q12986 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
NFX1Q12986 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
NFX1Q12986 AL031258.1-201ENST00000623562 325 ntBASIC32.01■■■□□ 2.71
NFX1Q12986 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32■■■□□ 2.71
NFX1Q12986 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
NFX1Q12986 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.93■■■□□ 2.7
NFX1Q12986 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.89■■■□□ 2.7
NFX1Q12986 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
NFX1Q12986 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
NFX1Q12986 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NFX1Q12986 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NFX1Q12986 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.8■■■□□ 2.68
NFX1Q12986 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.8■■■□□ 2.68
NFX1Q12986 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
NFX1Q12986 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
NFX1Q12986 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NFX1Q12986 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.74■■■□□ 2.67
NFX1Q12986 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NFX1Q12986 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
NFX1Q12986 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.72■■■□□ 2.67
NFX1Q12986 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
NFX1Q12986 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.65■■■□□ 2.66
NFX1Q12986 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NFX1Q12986 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.64■■■□□ 2.66
NFX1Q12986 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NFX1Q12986 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NFX1Q12986 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.57■■■□□ 2.64
NFX1Q12986 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.56■■■□□ 2.64
NFX1Q12986 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NFX1Q12986 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NFX1Q12986 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.52■■■□□ 2.64
NFX1Q12986 RARRES2P7-201ENST00000567349 469 ntBASIC31.5■■■□□ 2.63
NFX1Q12986 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.49■■■□□ 2.63
NFX1Q12986 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
NFX1Q12986 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NFX1Q12986 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
NFX1Q12986 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NFX1Q12986 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NFX1Q12986 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NFX1Q12986 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.39■■■□□ 2.62
NFX1Q12986 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.38■■■□□ 2.61
NFX1Q12986 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.38■■■□□ 2.61
NFX1Q12986 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NFX1Q12986 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
NFX1Q12986 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.37■■■□□ 2.61
NFX1Q12986 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.34■■■□□ 2.61
NFX1Q12986 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NFX1Q12986 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NFX1Q12986 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.32■■■□□ 2.6
NFX1Q12986 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
NFX1Q12986 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.3■■■□□ 2.6
NFX1Q12986 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.29■■■□□ 2.6
NFX1Q12986 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.29■■■□□ 2.6
NFX1Q12986 AC145285.7-201ENST00000614819 1539 ntBASIC31.29■■■□□ 2.6
NFX1Q12986 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.28■■■□□ 2.6
NFX1Q12986 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
NFX1Q12986 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.26■■■□□ 2.59
NFX1Q12986 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.25■■■□□ 2.59
NFX1Q12986 AC097358.2-201ENST00000607541 1159 ntBASIC31.22■■■□□ 2.59
NFX1Q12986 SETD8P1-201ENST00000623146 1180 ntBASIC31.22■■■□□ 2.59
NFX1Q12986 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.21■■■□□ 2.59
NFX1Q12986 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NFX1Q12986 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NFX1Q12986 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.17■■■□□ 2.58
NFX1Q12986 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.17■■■□□ 2.58
NFX1Q12986 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.16■■■□□ 2.58
NFX1Q12986 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NFX1Q12986 AC136428.2-201ENST00000563187 214 ntBASIC31.1■■■□□ 2.57
NFX1Q12986 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.08■■■□□ 2.57
NFX1Q12986 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NFX1Q12986 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NFX1Q12986 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
NFX1Q12986 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NFX1Q12986 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.98■■■□□ 2.55
NFX1Q12986 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NFX1Q12986 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.97■■■□□ 2.55
NFX1Q12986 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
NFX1Q12986 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.96■■■□□ 2.55
NFX1Q12986 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.95■■■□□ 2.55
NFX1Q12986 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NFX1Q12986 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.93■■■□□ 2.54
NFX1Q12986 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NFX1Q12986 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NFX1Q12986 SUZ12P1-203ENST00000578195 985 ntBASIC30.91■■■□□ 2.54
NFX1Q12986 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NFX1Q12986 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NFX1Q12986 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NFX1Q12986 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NFX1Q12986 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NFX1Q12986 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NFX1Q12986 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
NFX1Q12986 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
NFX1Q12986 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NFX1Q12986 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms