Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.37■□□□□ 0.69
HERC2O95714 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.36■□□□□ 0.69
HERC2O95714 HLA-V-202ENST00000446817 847 ntBASIC19.35■□□□□ 0.69
HERC2O95714 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.32■□□□□ 0.68
HERC2O95714 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HERC2O95714 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC2O95714 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC2O95714 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC2O95714 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.3■□□□□ 0.68
HERC2O95714 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC2O95714 AL162393.1-201ENST00000437852 946 ntBASIC19.29■□□□□ 0.68
HERC2O95714 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC2O95714 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC2O95714 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC2O95714 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.22■□□□□ 0.67
HERC2O95714 ABHD17AP4-201ENST00000411545 909 ntBASIC19.21■□□□□ 0.67
HERC2O95714 MIR7108-201ENST00000614319 87 ntBASIC19.21■□□□□ 0.67
HERC2O95714 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC2O95714 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC2O95714 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.19■□□□□ 0.66
HERC2O95714 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.18■□□□□ 0.66
HERC2O95714 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC2O95714 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC2O95714 SETD8P1-201ENST00000623146 1180 ntBASIC19.16■□□□□ 0.66
HERC2O95714 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.13■□□□□ 0.65
HERC2O95714 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HERC2O95714 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HERC2O95714 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC2O95714 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
HERC2O95714 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERC2O95714 AP006261.1-201ENST00000584783 668 ntBASIC19.04■□□□□ 0.64
HERC2O95714 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC2O95714 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.99■□□□□ 0.63
HERC2O95714 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC2O95714 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HERC2O95714 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.95■□□□□ 0.62
HERC2O95714 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.94■□□□□ 0.62
HERC2O95714 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC2O95714 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HERC2O95714 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HERC2O95714 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HERC2O95714 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC2O95714 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HERC2O95714 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC2O95714 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC2O95714 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC2O95714 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC2O95714 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HERC2O95714 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC2O95714 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.84■□□□□ 0.61
HERC2O95714 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERC2O95714 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.84■□□□□ 0.61
HERC2O95714 CAHM-201ENST00000604200 896 ntBASIC18.81■□□□□ 0.6
HERC2O95714 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC2O95714 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.79■□□□□ 0.6
HERC2O95714 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC2O95714 HSD17B1P1-201ENST00000590052 955 ntBASIC18.79■□□□□ 0.6
HERC2O95714 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERC2O95714 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC2O95714 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC2O95714 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.77■□□□□ 0.59
HERC2O95714 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HERC2O95714 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.75■□□□□ 0.59
HERC2O95714 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.74■□□□□ 0.59
HERC2O95714 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC2O95714 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC2O95714 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.73■□□□□ 0.59
HERC2O95714 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HERC2O95714 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
HERC2O95714 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC2O95714 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC2O95714 AL391121.1-201ENST00000607967 1349 ntBASIC18.7■□□□□ 0.58
HERC2O95714 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC2O95714 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.69■□□□□ 0.58
HERC2O95714 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.69■□□□□ 0.58
HERC2O95714 MIR4449-201ENST00000578365 66 ntBASIC18.68■□□□□ 0.58
HERC2O95714 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.67■□□□□ 0.58
HERC2O95714 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HERC2O95714 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.66■□□□□ 0.58
HERC2O95714 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC2O95714 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC2O95714 MIR3665-201ENST00000578708 105 ntBASIC18.64■□□□□ 0.57
HERC2O95714 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC2O95714 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC2O95714 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.63■□□□□ 0.57
HERC2O95714 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC2O95714 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC2O95714 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC2O95714 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.61■□□□□ 0.57
HERC2O95714 AC087741.3-201ENST00000624270 1347 ntBASIC18.6■□□□□ 0.57
HERC2O95714 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC2O95714 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC2O95714 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.59■□□□□ 0.57
HERC2O95714 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC2O95714 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC2O95714 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC2O95714 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC2O95714 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC2O95714 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC2O95714 HES6-203ENST00000409160 1600 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms