Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.6■■□□□ 1.85
TRIM3O75382 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM3O75382 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM3O75382 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM3O75382 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.56■■□□□ 1.84
TRIM3O75382 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM3O75382 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM3O75382 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.83
TRIM3O75382 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM3O75382 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM3O75382 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM3O75382 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM3O75382 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
TRIM3O75382 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
TRIM3O75382 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM3O75382 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM3O75382 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM3O75382 DYNLL1-208ENST00000550178 581 ntBASIC26.38■■□□□ 1.81
TRIM3O75382 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM3O75382 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM3O75382 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM3O75382 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM3O75382 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM3O75382 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM3O75382 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM3O75382 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM3O75382 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM3O75382 AC145285.7-201ENST00000614819 1539 ntBASIC26.29■■□□□ 1.8
TRIM3O75382 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TRIM3O75382 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM3O75382 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM3O75382 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM3O75382 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
TRIM3O75382 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TRIM3O75382 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM3O75382 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM3O75382 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM3O75382 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TRIM3O75382 AL031258.1-201ENST00000623562 325 ntBASIC26.21■■□□□ 1.79
TRIM3O75382 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRIM3O75382 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM3O75382 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM3O75382 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM3O75382 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM3O75382 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM3O75382 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM3O75382 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM3O75382 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
TRIM3O75382 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.12■■□□□ 1.77
TRIM3O75382 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM3O75382 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM3O75382 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM3O75382 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TRIM3O75382 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM3O75382 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM3O75382 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM3O75382 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM3O75382 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.02■■□□□ 1.76
TRIM3O75382 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.02■■□□□ 1.76
TRIM3O75382 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM3O75382 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.98■■□□□ 1.75
TRIM3O75382 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.96■■□□□ 1.75
TRIM3O75382 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.96■■□□□ 1.75
TRIM3O75382 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.96■■□□□ 1.75
TRIM3O75382 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.96■■□□□ 1.75
TRIM3O75382 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.74
TRIM3O75382 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.94■■□□□ 1.74
TRIM3O75382 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.94■■□□□ 1.74
TRIM3O75382 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.92■■□□□ 1.74
TRIM3O75382 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM3O75382 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIM3O75382 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
TRIM3O75382 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM3O75382 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM3O75382 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM3O75382 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM3O75382 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
TRIM3O75382 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM3O75382 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.83■■□□□ 1.73
TRIM3O75382 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIM3O75382 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TRIM3O75382 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM3O75382 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIM3O75382 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.79■■□□□ 1.72
TRIM3O75382 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM3O75382 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM3O75382 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM3O75382 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.73■■□□□ 1.71
TRIM3O75382 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
TRIM3O75382 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM3O75382 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.72■■□□□ 1.71
TRIM3O75382 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM3O75382 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM3O75382 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM3O75382 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
TRIM3O75382 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM3O75382 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM3O75382 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM3O75382 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.63■■□□□ 1.69
TRIM3O75382 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms