Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.81■■■□□ 2.68
NCK2O43639 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
NCK2O43639 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NCK2O43639 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
NCK2O43639 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NCK2O43639 DYNLL1-208ENST00000550178 581 ntBASIC31.73■■■□□ 2.67
NCK2O43639 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
NCK2O43639 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCK2O43639 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.68■■■□□ 2.66
NCK2O43639 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NCK2O43639 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
NCK2O43639 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.63■■■□□ 2.65
NCK2O43639 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NCK2O43639 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
NCK2O43639 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.6■■■□□ 2.65
NCK2O43639 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NCK2O43639 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.58■■■□□ 2.65
NCK2O43639 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NCK2O43639 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NCK2O43639 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NCK2O43639 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.52■■■□□ 2.64
NCK2O43639 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
NCK2O43639 AL031258.1-201ENST00000623562 325 ntBASIC31.49■■■□□ 2.63
NCK2O43639 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
NCK2O43639 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.46■■■□□ 2.63
NCK2O43639 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.46■■■□□ 2.63
NCK2O43639 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
NCK2O43639 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.45■■■□□ 2.63
NCK2O43639 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NCK2O43639 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NCK2O43639 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.41■■■□□ 2.62
NCK2O43639 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NCK2O43639 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.39■■■□□ 2.62
NCK2O43639 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.39■■■□□ 2.62
NCK2O43639 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.38■■■□□ 2.61
NCK2O43639 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
NCK2O43639 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NCK2O43639 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
NCK2O43639 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NCK2O43639 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.36■■■□□ 2.61
NCK2O43639 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.35■■■□□ 2.61
NCK2O43639 RARRES2P7-201ENST00000567349 469 ntBASIC31.27■■■□□ 2.6
NCK2O43639 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.24■■■□□ 2.59
NCK2O43639 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCK2O43639 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.22■■■□□ 2.59
NCK2O43639 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.21■■■□□ 2.59
NCK2O43639 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NCK2O43639 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.19■■■□□ 2.58
NCK2O43639 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCK2O43639 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
NCK2O43639 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
NCK2O43639 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NCK2O43639 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
NCK2O43639 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NCK2O43639 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
NCK2O43639 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NCK2O43639 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
NCK2O43639 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCK2O43639 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
NCK2O43639 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NCK2O43639 AC097358.2-201ENST00000607541 1159 ntBASIC31.05■■■□□ 2.56
NCK2O43639 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
NCK2O43639 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NCK2O43639 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.02■■■□□ 2.56
NCK2O43639 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NCK2O43639 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31■■■□□ 2.55
NCK2O43639 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NCK2O43639 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.95■■■□□ 2.55
NCK2O43639 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.93■■■□□ 2.54
NCK2O43639 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
NCK2O43639 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.89■■■□□ 2.54
NCK2O43639 SETD8P1-201ENST00000623146 1180 ntBASIC30.89■■■□□ 2.54
NCK2O43639 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NCK2O43639 AC136428.2-201ENST00000563187 214 ntBASIC30.86■■■□□ 2.53
NCK2O43639 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NCK2O43639 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.83■■■□□ 2.53
NCK2O43639 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NCK2O43639 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NCK2O43639 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
NCK2O43639 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NCK2O43639 RPS2P35-201ENST00000443417 897 ntBASIC30.81■■■□□ 2.52
NCK2O43639 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NCK2O43639 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.8■■■□□ 2.52
NCK2O43639 SUZ12P1-203ENST00000578195 985 ntBASIC30.79■■■□□ 2.52
NCK2O43639 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
NCK2O43639 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCK2O43639 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.74■■■□□ 2.51
NCK2O43639 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
NCK2O43639 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NCK2O43639 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NCK2O43639 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NCK2O43639 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
NCK2O43639 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.69■■■□□ 2.5
NCK2O43639 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.69■■■□□ 2.5
NCK2O43639 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCK2O43639 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCK2O43639 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.68■■■□□ 2.5
NCK2O43639 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCK2O43639 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
NCK2O43639 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms