Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
PPM1DO15297 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
PPM1DO15297 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.34■■■□□ 2.13
PPM1DO15297 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPM1DO15297 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
PPM1DO15297 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PPM1DO15297 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPM1DO15297 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPM1DO15297 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPM1DO15297 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PPM1DO15297 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PPM1DO15297 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPM1DO15297 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPM1DO15297 AL031258.1-201ENST00000623562 325 ntBASIC28.22■■■□□ 2.11
PPM1DO15297 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.17■■■□□ 2.1
PPM1DO15297 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
PPM1DO15297 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPM1DO15297 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPM1DO15297 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.1■■■□□ 2.09
PPM1DO15297 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PPM1DO15297 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PPM1DO15297 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.08■■■□□ 2.09
PPM1DO15297 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.04■■■□□ 2.08
PPM1DO15297 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.03■■■□□ 2.08
PPM1DO15297 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
PPM1DO15297 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PPM1DO15297 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PPM1DO15297 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.97■■■□□ 2.07
PPM1DO15297 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.97■■■□□ 2.07
PPM1DO15297 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.97■■■□□ 2.07
PPM1DO15297 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.96■■■□□ 2.07
PPM1DO15297 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PPM1DO15297 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PPM1DO15297 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PPM1DO15297 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PPM1DO15297 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PPM1DO15297 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PPM1DO15297 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.84■■■□□ 2.05
PPM1DO15297 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
PPM1DO15297 AC145285.7-201ENST00000614819 1539 ntBASIC27.82■■■□□ 2.04
PPM1DO15297 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
PPM1DO15297 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.81■■■□□ 2.04
PPM1DO15297 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.8■■■□□ 2.04
PPM1DO15297 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
PPM1DO15297 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PPM1DO15297 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.79■■■□□ 2.04
PPM1DO15297 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.78■■■□□ 2.04
PPM1DO15297 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.76■■■□□ 2.03
PPM1DO15297 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PPM1DO15297 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.74■■■□□ 2.03
PPM1DO15297 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PPM1DO15297 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPM1DO15297 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPM1DO15297 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
PPM1DO15297 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PPM1DO15297 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PPM1DO15297 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
PPM1DO15297 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PPM1DO15297 RARRES2P7-201ENST00000567349 469 ntBASIC27.64■■■□□ 2.02
PPM1DO15297 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PPM1DO15297 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.64■■■□□ 2.01
PPM1DO15297 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PPM1DO15297 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
PPM1DO15297 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.58■■■□□ 2.01
PPM1DO15297 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.57■■■□□ 2
PPM1DO15297 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.56■■■□□ 2
PPM1DO15297 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.55■■■□□ 2
PPM1DO15297 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PPM1DO15297 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.52■■■□□ 2
PPM1DO15297 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.52■■■□□ 2
PPM1DO15297 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.51■■□□□ 1.99
PPM1DO15297 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.5■■□□□ 1.99
PPM1DO15297 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PPM1DO15297 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
PPM1DO15297 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PPM1DO15297 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
PPM1DO15297 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.44■■□□□ 1.98
PPM1DO15297 SETD8P1-201ENST00000623146 1180 ntBASIC27.44■■□□□ 1.98
PPM1DO15297 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
PPM1DO15297 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.42■■□□□ 1.98
PPM1DO15297 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PPM1DO15297 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.41■■□□□ 1.98
PPM1DO15297 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PPM1DO15297 AC097358.2-201ENST00000607541 1159 ntBASIC27.41■■□□□ 1.98
PPM1DO15297 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PPM1DO15297 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.37■■□□□ 1.97
PPM1DO15297 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PPM1DO15297 AC136428.2-201ENST00000563187 214 ntBASIC27.36■■□□□ 1.97
PPM1DO15297 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PPM1DO15297 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PPM1DO15297 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PPM1DO15297 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.33■■□□□ 1.97
PPM1DO15297 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PPM1DO15297 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PPM1DO15297 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.3■■□□□ 1.96
PPM1DO15297 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PPM1DO15297 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PPM1DO15297 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.27■■□□□ 1.96
PPM1DO15297 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PPM1DO15297 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms