Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23■■□□□ 1.27
TCRBV4S1A1TA0A5B7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV4S1A1TA0A5B7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV4S1A1TA0A5B7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
TCRBV4S1A1TA0A5B7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV4S1A1TA0A5B7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.92■■□□□ 1.26
TCRBV4S1A1TA0A5B7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV4S1A1TA0A5B7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.91■■□□□ 1.26
TCRBV4S1A1TA0A5B7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV4S1A1TA0A5B7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
TCRBV4S1A1TA0A5B7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.9■■□□□ 1.26
TCRBV4S1A1TA0A5B7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.88■■□□□ 1.25
TCRBV4S1A1TA0A5B7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TCRBV4S1A1TA0A5B7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.88■■□□□ 1.25
TCRBV4S1A1TA0A5B7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV4S1A1TA0A5B7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV4S1A1TA0A5B7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV4S1A1TA0A5B7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV4S1A1TA0A5B7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.8■■□□□ 1.24
TCRBV4S1A1TA0A5B7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TCRBV4S1A1TA0A5B7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV4S1A1TA0A5B7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.77■■□□□ 1.24
TCRBV4S1A1TA0A5B7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV4S1A1TA0A5B7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV4S1A1TA0A5B7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV4S1A1TA0A5B7 DYNLL1-208ENST00000550178 581 ntBASIC22.73■■□□□ 1.23
TCRBV4S1A1TA0A5B7 AC145285.7-201ENST00000614819 1539 ntBASIC22.72■■□□□ 1.23
TCRBV4S1A1TA0A5B7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.72■■□□□ 1.23
TCRBV4S1A1TA0A5B7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
TCRBV4S1A1TA0A5B7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV4S1A1TA0A5B7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TCRBV4S1A1TA0A5B7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TCRBV4S1A1TA0A5B7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
TCRBV4S1A1TA0A5B7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
TCRBV4S1A1TA0A5B7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV4S1A1TA0A5B7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV4S1A1TA0A5B7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV4S1A1TA0A5B7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV4S1A1TA0A5B7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV4S1A1TA0A5B7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV4S1A1TA0A5B7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV4S1A1TA0A5B7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TCRBV4S1A1TA0A5B7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
TCRBV4S1A1TA0A5B7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TCRBV4S1A1TA0A5B7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TCRBV4S1A1TA0A5B7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV4S1A1TA0A5B7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TCRBV4S1A1TA0A5B7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV4S1A1TA0A5B7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV4S1A1TA0A5B7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV4S1A1TA0A5B7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
TCRBV4S1A1TA0A5B7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV4S1A1TA0A5B7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV4S1A1TA0A5B7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV4S1A1TA0A5B7 AL031258.1-201ENST00000623562 325 ntBASIC22.53■■□□□ 1.2
TCRBV4S1A1TA0A5B7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV4S1A1TA0A5B7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.52■■□□□ 1.2
TCRBV4S1A1TA0A5B7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.51■■□□□ 1.19
TCRBV4S1A1TA0A5B7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV4S1A1TA0A5B7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV4S1A1TA0A5B7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.46■■□□□ 1.19
TCRBV4S1A1TA0A5B7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
TCRBV4S1A1TA0A5B7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TCRBV4S1A1TA0A5B7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TCRBV4S1A1TA0A5B7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV4S1A1TA0A5B7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV4S1A1TA0A5B7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.42■■□□□ 1.18
TCRBV4S1A1TA0A5B7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.4■■□□□ 1.18
TCRBV4S1A1TA0A5B7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.4■■□□□ 1.18
TCRBV4S1A1TA0A5B7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.4■■□□□ 1.18
TCRBV4S1A1TA0A5B7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV4S1A1TA0A5B7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.38■■□□□ 1.17
TCRBV4S1A1TA0A5B7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV4S1A1TA0A5B7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV4S1A1TA0A5B7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV4S1A1TA0A5B7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TCRBV4S1A1TA0A5B7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TCRBV4S1A1TA0A5B7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
TCRBV4S1A1TA0A5B7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TCRBV4S1A1TA0A5B7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TCRBV4S1A1TA0A5B7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.33■■□□□ 1.17
TCRBV4S1A1TA0A5B7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.32■■□□□ 1.16
TCRBV4S1A1TA0A5B7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV4S1A1TA0A5B7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.3■■□□□ 1.16
TCRBV4S1A1TA0A5B7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.3■■□□□ 1.16
TCRBV4S1A1TA0A5B7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV4S1A1TA0A5B7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.3■■□□□ 1.16
TCRBV4S1A1TA0A5B7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV4S1A1TA0A5B7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV4S1A1TA0A5B7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV4S1A1TA0A5B7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV4S1A1TA0A5B7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV4S1A1TA0A5B7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
TCRBV4S1A1TA0A5B7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV4S1A1TA0A5B7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TCRBV4S1A1TA0A5B7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV4S1A1TA0A5B7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV4S1A1TA0A5B7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV4S1A1TA0A5B7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.24■■□□□ 1.15
TCRBV4S1A1TA0A5B7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms