Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEFF1Q8IYR6 AC096631.2-201ENST00000436136 790 ntBASIC23.67■■□□□ 1.38
TMEFF1Q8IYR6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.67■■□□□ 1.38
TMEFF1Q8IYR6 MIR4466-201ENST00000606121 54 ntBASIC23.67■■□□□ 1.38
TMEFF1Q8IYR6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEFF1Q8IYR6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEFF1Q8IYR6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 AC011551.1-201ENST00000614101 683 ntBASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEFF1Q8IYR6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TMEFF1Q8IYR6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEFF1Q8IYR6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEFF1Q8IYR6 AC005837.3-201ENST00000612163 286 ntBASIC23.64■■□□□ 1.37
TMEFF1Q8IYR6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
TMEFF1Q8IYR6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEFF1Q8IYR6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.63■■□□□ 1.37
TMEFF1Q8IYR6 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEFF1Q8IYR6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEFF1Q8IYR6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.61■■□□□ 1.37
TMEFF1Q8IYR6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEFF1Q8IYR6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.6■■□□□ 1.37
TMEFF1Q8IYR6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TMEFF1Q8IYR6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEFF1Q8IYR6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEFF1Q8IYR6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TMEFF1Q8IYR6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.58■■□□□ 1.37
TMEFF1Q8IYR6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEFF1Q8IYR6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
TMEFF1Q8IYR6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEFF1Q8IYR6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEFF1Q8IYR6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 AL512631.2-201ENST00000604634 923 ntBASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEFF1Q8IYR6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEFF1Q8IYR6 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.55■■□□□ 1.36
TMEFF1Q8IYR6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.55■■□□□ 1.36
TMEFF1Q8IYR6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEFF1Q8IYR6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 AF131216.4-201ENST00000638924 1588 ntBASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEFF1Q8IYR6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEFF1Q8IYR6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEFF1Q8IYR6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEFF1Q8IYR6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.51■■□□□ 1.35
TMEFF1Q8IYR6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms