Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.23■■■□□ 2.11
HTRA3P83110 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
HTRA3P83110 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HTRA3P83110 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.22■■■□□ 2.11
HTRA3P83110 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HTRA3P83110 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HTRA3P83110 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
HTRA3P83110 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.21■■■□□ 2.11
HTRA3P83110 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.21■■■□□ 2.11
HTRA3P83110 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.21■■■□□ 2.11
HTRA3P83110 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
HTRA3P83110 AC004448.1-201ENST00000458332 883 ntBASIC28.2■■■□□ 2.1
HTRA3P83110 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
HTRA3P83110 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC28.2■■■□□ 2.1
HTRA3P83110 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
HTRA3P83110 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
HTRA3P83110 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
HTRA3P83110 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
HTRA3P83110 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
HTRA3P83110 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HTRA3P83110 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.18■■■□□ 2.1
HTRA3P83110 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HTRA3P83110 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HTRA3P83110 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
HTRA3P83110 AL031602.1-201ENST00000633169 911 ntBASIC28.17■■■□□ 2.1
HTRA3P83110 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
HTRA3P83110 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.16■■■□□ 2.1
HTRA3P83110 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HTRA3P83110 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
HTRA3P83110 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
HTRA3P83110 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.15■■■□□ 2.1
HTRA3P83110 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HTRA3P83110 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HTRA3P83110 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
HTRA3P83110 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HTRA3P83110 AC066615.1-201ENST00000640911 628 ntBASIC28.14■■■□□ 2.1
HTRA3P83110 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
HTRA3P83110 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HTRA3P83110 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HTRA3P83110 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.13■■■□□ 2.09
HTRA3P83110 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.12■■■□□ 2.09
HTRA3P83110 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
HTRA3P83110 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.12■■■□□ 2.09
HTRA3P83110 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HTRA3P83110 AC008764.7-201ENST00000593779 1081 ntBASIC28.12■■■□□ 2.09
HTRA3P83110 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.12■■■□□ 2.09
HTRA3P83110 AF131216.4-201ENST00000638924 1588 ntBASIC28.11■■■□□ 2.09
HTRA3P83110 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HTRA3P83110 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.11■■■□□ 2.09
HTRA3P83110 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.11■■■□□ 2.09
HTRA3P83110 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HTRA3P83110 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.1■■■□□ 2.09
HTRA3P83110 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.1■■■□□ 2.09
HTRA3P83110 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.1■■■□□ 2.09
HTRA3P83110 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
HTRA3P83110 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.1■■■□□ 2.09
HTRA3P83110 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.1■■■□□ 2.09
HTRA3P83110 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
HTRA3P83110 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
HTRA3P83110 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HTRA3P83110 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HTRA3P83110 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HTRA3P83110 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.09■■■□□ 2.09
HTRA3P83110 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
HTRA3P83110 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
HTRA3P83110 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HTRA3P83110 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
HTRA3P83110 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.08■■■□□ 2.09
HTRA3P83110 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.08■■■□□ 2.09
HTRA3P83110 AC027682.1-201ENST00000562846 899 ntBASIC28.08■■■□□ 2.09
HTRA3P83110 AP002414.2-202ENST00000590929 1450 ntBASIC28.08■■■□□ 2.09
HTRA3P83110 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HTRA3P83110 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HTRA3P83110 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.07■■■□□ 2.08
HTRA3P83110 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HTRA3P83110 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
HTRA3P83110 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.06■■■□□ 2.08
HTRA3P83110 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.06■■■□□ 2.08
HTRA3P83110 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HTRA3P83110 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
HTRA3P83110 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
HTRA3P83110 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HTRA3P83110 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
HTRA3P83110 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L2-201ENST00000561772 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L6-201ENST00000626483 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L1-201ENST00000627662 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L8-201ENST00000629013 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L3-201ENST00000630187 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L7-201ENST00000630678 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 DUX4L5-201ENST00000630834 1275 ntBASIC28.05■■■□□ 2.08
HTRA3P83110 TMEM191A-211ENST00000637163 1067 ntBASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms