RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 NISCHQ9Y2I1 1504 aa54.97■■■■■ 6.39
VAMP2-204ENST00000488857 CCDC180Q9P1Z9 1646 aa49.04■■■■■ 5.44
VAMP2-204ENST00000488857 ABCC9O60706 1549 aa48.07■■■■■ 5.29
VAMP2-204ENST00000488857 RB1CC1Q8TDY2 1594 aa46.22■■■■■ 4.99
VAMP2-204ENST00000488857 NACADO15069 1562 aa46.13■■■■■ 4.98
VAMP2-204ENST00000488857 MYO15BQ96JP2 1530 aa45.84■■■■■ 4.93
VAMP2-204ENST00000488857 DCAF8L2P0C7V8 631 aa45.83■■■■■ 4.93
VAMP2-204ENST00000488857 ZCCHC6Q5VYS8 1495 aaKnown RBP45.76■■■■■ 4.92
VAMP2-204ENST00000488857 DCAF1Q9Y4B6 1507 aa45.55■■■■■ 4.88
VAMP2-204ENST00000488857 UNC13AQ9UPW8 1703 aa45.19■■■■■ 4.82
VAMP2-204ENST00000488857 BICRAQ9NZM4 1560 aa44.85■■■■■ 4.77
VAMP2-204ENST00000488857 PABPN1Q86U42 306 aaKnown RBP eCLIP44.83■■■■■ 4.77
VAMP2-204ENST00000488857 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
VAMP2-204ENST00000488857 SHROOM4Q9ULL8 1493 aa44.42■■■■■ 4.7
VAMP2-204ENST00000488857 DNAJC5BQ9UF47 199 aa44.33■■■■■ 4.69
VAMP2-204ENST00000488857 EIF4G1Q04637 1599 aaKnown RBP43.67■■■■■ 4.58
VAMP2-204ENST00000488857 CC2D2AQ9P2K1 1620 aa43.53■■■■■ 4.56
VAMP2-204ENST00000488857 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
VAMP2-204ENST00000488857 SMARCA4P51532 1647 aa42.71■■■■■ 4.43
VAMP2-204ENST00000488857 BAZ1AQ9NRL2 1556 aaPredicted RBP42.63■■■■■ 4.41
VAMP2-204ENST00000488857 NCAPD3P42695 1498 aa42.57■■■■■ 4.41
VAMP2-204ENST00000488857 ATAD2BQ9ULI0 1458 aa42.53■■■■■ 4.4
VAMP2-204ENST00000488857 SMARCA2P51531 1590 aa42.48■■■■■ 4.39
VAMP2-204ENST00000488857 HMGXB3Q12766 1538 aa42.36■■■■■ 4.37
VAMP2-204ENST00000488857 PEG3Q9GZU2 1588 aa42.35■■■■■ 4.37
VAMP2-204ENST00000488857 MROH2BQ7Z745 1585 aa42.33■■■■■ 4.37
VAMP2-204ENST00000488857 BAZ1BQ9UIG0 1483 aaKnown RBP42.14■■■■■ 4.34
VAMP2-204ENST00000488857 WIZO95785 1651 aa41.86■■■■■ 4.29
VAMP2-204ENST00000488857 RSF1Q96T23 1441 aaPredicted RBP41.77■■■■■ 4.28
VAMP2-204ENST00000488857 NESP48681 1621 aa41.54■■■■■ 4.24
VAMP2-204ENST00000488857 LAMC3Q9Y6N6 1575 aa41.48■■■■■ 4.23
VAMP2-204ENST00000488857 ERCC6Q03468 1493 aa41.45■■■■■ 4.23
VAMP2-204ENST00000488857 TOP2AP11388 1531 aaKnown RBP41.44■■■■■ 4.22
VAMP2-204ENST00000488857 CADPSQ9ULU8 1353 aa41.27■■■■■ 4.2
VAMP2-204ENST00000488857 CUX2O14529 1486 aa41.19■■■■■ 4.18
VAMP2-204ENST00000488857 PDS5BQ9NTI5 1447 aa41.18■■■■■ 4.18
VAMP2-204ENST00000488857 KIF21AQ7Z4S6 1674 aa41.09■■■■■ 4.17
VAMP2-204ENST00000488857 THOC2Q8NI27 1593 aaKnown RBP41.03■■■■■ 4.16
VAMP2-204ENST00000488857 CFTRP13569 1480 aa41.02■■■■■ 4.16
VAMP2-204ENST00000488857 CCDC88BA6NC98 1476 aa40.91■■■■■ 4.14
VAMP2-204ENST00000488857 FANCD2Q9BXW9 1451 aa40.79■■■■■ 4.12
VAMP2-204ENST00000488857 MRC2Q9UBG0 1479 aa40.77■■■■■ 4.12
VAMP2-204ENST00000488857 CEP164Q9UPV0 1460 aa40.77■■■■■ 4.12
VAMP2-204ENST00000488857 PRDM2Q13029 1718 aa40.73■■■■■ 4.11
VAMP2-204ENST00000488857 WDR62O43379 1518 aa40.68■■■■■ 4.1
VAMP2-204ENST00000488857 URB2Q14146 1524 aaKnown RBP40.41■■■■■ 4.06
VAMP2-204ENST00000488857 SUPT5HO00267 1087 aaKnown RBP40.39■■■■■ 4.06
VAMP2-204ENST00000488857 DNAJC5Q9H3Z4 198 aa40.15■■■■■ 4.02
VAMP2-204ENST00000488857 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
VAMP2-204ENST00000488857 TOPBP1Q92547 1522 aa40.12■■■■■ 4.01
VAMP2-204ENST00000488857 DNMBPQ6XZF7 1577 aa40.08■■■■■ 4.01
VAMP2-204ENST00000488857 IFT140Q96RY7 1462 aa39.94■■■■□ 3.98
VAMP2-204ENST00000488857 POLA1P09884 1462 aaPredicted RBP39.77■■■■□ 3.96
VAMP2-204ENST00000488857 TARBP1Q13395 1621 aaKnown RBP39.75■■■■□ 3.95
VAMP2-204ENST00000488857 ZNF608Q9ULD9 1512 aaPredicted RBP39.75■■■■□ 3.95
VAMP2-204ENST00000488857 CUX1P39880 1505 aa39.74■■■■□ 3.95
VAMP2-204ENST00000488857 FGD5Q6ZNL6 1462 aa39.62■■■■□ 3.93
VAMP2-204ENST00000488857 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
VAMP2-204ENST00000488857 SOGA1O94964 1423 aa39.57■■■■□ 3.92
VAMP2-204ENST00000488857 RAD54L2Q9Y4B4 1467 aa39.56■■■■□ 3.92
VAMP2-204ENST00000488857 AQRO60306 1485 aaKnown RBP eCLIP39.48■■■■□ 3.912e-9■■■■■ 31
VAMP2-204ENST00000488857 WDR97A6NE52 1622 aa39.47■■■■□ 3.91
VAMP2-204ENST00000488857 WRNQ14191 1432 aaPredicted RBP eCLIP39.38■■■■□ 3.89
VAMP2-204ENST00000488857 BIVM-ERCC5R4GMW8 1640 aa39.37■■■■□ 3.89
VAMP2-204ENST00000488857 TOP2BQ02880 1626 aa39.36■■■■□ 3.89
VAMP2-204ENST00000488857 OSCARQ8IYS5 282 aa39.36■■■■□ 3.89
VAMP2-204ENST00000488857 TDRD9Q8NDG6 1382 aaKnown RBP39.35■■■■□ 3.89
VAMP2-204ENST00000488857 SYNJ1O43426 1573 aa39.3■■■■□ 3.88
VAMP2-204ENST00000488857 ABCA10Q8WWZ4 1543 aa39.27■■■■□ 3.88
VAMP2-204ENST00000488857 GRIN2BQ13224 1484 aa39.17■■■■□ 3.86
VAMP2-204ENST00000488857 CHD1O14646 1710 aa39.15■■■■□ 3.86
VAMP2-204ENST00000488857 ABCA5Q8WWZ7 1642 aa39.14■■■■□ 3.86
VAMP2-204ENST00000488857 GAPVD1Q14C86 1478 aa39.13■■■■□ 3.85
VAMP2-204ENST00000488857 SNAPC4Q5SXM2 1469 aa39.12■■■■□ 3.85
VAMP2-204ENST00000488857 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
VAMP2-204ENST00000488857 PBRM1Q86U86 1689 aa39.09■■■■□ 3.85
VAMP2-204ENST00000488857 FBLN2P98095 1184 aa38.96■■■■□ 3.83
VAMP2-204ENST00000488857 SYNJ2O15056 1496 aa38.95■■■■□ 3.83
VAMP2-204ENST00000488857 CHMP7Q8WUX9 453 aaPredicted RBP38.88■■■■□ 3.81
VAMP2-204ENST00000488857 ERICH3Q5RHP9 1530 aa38.81■■■■□ 3.8
VAMP2-204ENST00000488857 RIMBP3CA6NJZ7 1639 aa38.79■■■■□ 3.8
VAMP2-204ENST00000488857 RIMBP3BA6NNM3 1639 aa38.79■■■■□ 3.8
VAMP2-204ENST00000488857 RIMBP3Q9UFD9 1639 aa38.79■■■■□ 3.8
VAMP2-204ENST00000488857 ARHGEF11O15085 1522 aa38.77■■■■□ 3.8
VAMP2-204ENST00000488857 ADAMTS12P58397 1594 aa38.77■■■■□ 3.8
VAMP2-204ENST00000488857 CLASP1Q7Z460 1538 aa38.76■■■■□ 3.8
VAMP2-204ENST00000488857 FHAD1B1AJZ9 1412 aa38.68■■■■□ 3.78
VAMP2-204ENST00000488857 GRIN2AQ12879 1464 aa38.66■■■■□ 3.78
VAMP2-204ENST00000488857 TRIM41Q8WV44 630 aa38.62■■■■□ 3.77
VAMP2-204ENST00000488857 KIF27Q86VH2 1401 aa38.57■■■■□ 3.77
VAMP2-204ENST00000488857 NUP160Q12769 1436 aa38.54■■■■□ 3.76
VAMP2-204ENST00000488857 CEP170Q5SW79 1584 aa38.48■■■■□ 3.75
VAMP2-204ENST00000488857 IGF1RP08069 1367 aa38.45■■■■□ 3.75
VAMP2-204ENST00000488857 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
VAMP2-204ENST00000488857 CUL7Q14999 1698 aa38.4■■■■□ 3.74
VAMP2-204ENST00000488857 CYB5RLQ6IPT4 315 aa38.33■■■■□ 3.73
VAMP2-204ENST00000488857 SHROOM2Q13796 1616 aa38.29■■■■□ 3.72
VAMP2-204ENST00000488857 RUSC2Q8N2Y8 1516 aa38.21■■■■□ 3.71
VAMP2-204ENST00000488857 CARMIL1Q5VZK9 1371 aa38.19■■■■□ 3.7
VAMP2-204ENST00000488857 ERCC6L2Q5T890 1561 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms