RNA–Protein interactions for RNA: ENST00000543927.5

SCO2-204, Transcript of SCO2, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCO2, Length 1,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO2-204ENST00000543927 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
SCO2-204ENST00000543927 CCDC180Q9P1Z9 1646 aa48.8■■■■■ 5.4
SCO2-204ENST00000543927 ABCC9O60706 1549 aa48.12■■■■■ 5.29
SCO2-204ENST00000543927 RB1CC1Q8TDY2 1594 aa46.12■■■■■ 4.97
SCO2-204ENST00000543927 NACADO15069 1562 aa45.97■■■■■ 4.95
SCO2-204ENST00000543927 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
SCO2-204ENST00000543927 MYO15BQ96JP2 1530 aa45.59■■■■■ 4.89
SCO2-204ENST00000543927 ZCCHC6Q5VYS8 1495 aaKnown RBP45.44■■■■■ 4.87
SCO2-204ENST00000543927 DCAF1Q9Y4B6 1507 aa45.22■■■■■ 4.83
SCO2-204ENST00000543927 UNC13AQ9UPW8 1703 aa45.09■■■■■ 4.81
SCO2-204ENST00000543927 PABPN1Q86U42 306 aaKnown RBP eCLIP44.86■■■■■ 4.77
SCO2-204ENST00000543927 BICRAQ9NZM4 1560 aa44.77■■■■■ 4.76
SCO2-204ENST00000543927 DNAJC5BQ9UF47 199 aa44.57■■■■■ 4.73
SCO2-204ENST00000543927 SCRIBQ14160 1630 aa44.44■■■■■ 4.7
SCO2-204ENST00000543927 SHROOM4Q9ULL8 1493 aa44.27■■■■■ 4.68
SCO2-204ENST00000543927 EIF4G1Q04637 1599 aaKnown RBP43.6■■■■■ 4.57
SCO2-204ENST00000543927 CC2D2AQ9P2K1 1620 aa43.53■■■■■ 4.56
SCO2-204ENST00000543927 CECR2Q9BXF3 1484 aa43.29■■■■■ 4.52
SCO2-204ENST00000543927 SMARCA4P51532 1647 aa42.49■■■■■ 4.39
SCO2-204ENST00000543927 NCAPD3P42695 1498 aa42.43■■■■■ 4.38
SCO2-204ENST00000543927 BAZ1AQ9NRL2 1556 aaPredicted RBP42.38■■■■■ 4.37
SCO2-204ENST00000543927 ATAD2BQ9ULI0 1458 aa42.37■■■■■ 4.37
SCO2-204ENST00000543927 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
SCO2-204ENST00000543927 HMGXB3Q12766 1538 aa42.19■■■■■ 4.34
SCO2-204ENST00000543927 PEG3Q9GZU2 1588 aa42.12■■■■■ 4.33
SCO2-204ENST00000543927 MROH2BQ7Z745 1585 aa42.1■■■■■ 4.33
SCO2-204ENST00000543927 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
SCO2-204ENST00000543927 WIZO95785 1651 aa41.61■■■■■ 4.25
SCO2-204ENST00000543927 NESP48681 1621 aa41.51■■■■■ 4.24
SCO2-204ENST00000543927 ERCC6Q03468 1493 aa41.49■■■■■ 4.23
SCO2-204ENST00000543927 RSF1Q96T23 1441 aaPredicted RBP41.45■■■■■ 4.23
SCO2-204ENST00000543927 LAMC3Q9Y6N6 1575 aa41.37■■■■■ 4.21
SCO2-204ENST00000543927 CUX2O14529 1486 aa41.26■■■■■ 4.2
SCO2-204ENST00000543927 TOP2AP11388 1531 aaKnown RBP41.16■■■■■ 4.18
SCO2-204ENST00000543927 CADPSQ9ULU8 1353 aa41.14■■■■■ 4.18
SCO2-204ENST00000543927 PDS5BQ9NTI5 1447 aa41.09■■■■■ 4.17
SCO2-204ENST00000543927 KIF21AQ7Z4S6 1674 aa41.03■■■■■ 4.16
SCO2-204ENST00000543927 THOC2Q8NI27 1593 aaKnown RBP41.02■■■■■ 4.16
SCO2-204ENST00000543927 CFTRP13569 1480 aa40.83■■■■■ 4.13
SCO2-204ENST00000543927 MRC2Q9UBG0 1479 aa40.7■■■■■ 4.11
SCO2-204ENST00000543927 FANCD2Q9BXW9 1451 aa40.67■■■■■ 4.1
SCO2-204ENST00000543927 CCDC88BA6NC98 1476 aa40.66■■■■■ 4.1
SCO2-204ENST00000543927 CEP164Q9UPV0 1460 aa40.66■■■■■ 4.1
SCO2-204ENST00000543927 WDR62O43379 1518 aa40.61■■■■■ 4.09
SCO2-204ENST00000543927 PRDM2Q13029 1718 aa40.5■■■■■ 4.07
SCO2-204ENST00000543927 DNAJC5Q9H3Z4 198 aa40.49■■■■■ 4.07
SCO2-204ENST00000543927 URB2Q14146 1524 aaKnown RBP40.31■■■■■ 4.04
SCO2-204ENST00000543927 SUPT5HO00267 1087 aaKnown RBP39.99■■■■□ 3.99
SCO2-204ENST00000543927 TOPBP1Q92547 1522 aa39.98■■■■□ 3.99
SCO2-204ENST00000543927 ABCC8Q09428 1581 aa39.96■■■■□ 3.99
SCO2-204ENST00000543927 DNMBPQ6XZF7 1577 aa39.9■■■■□ 3.98
SCO2-204ENST00000543927 IFT140Q96RY7 1462 aa39.84■■■■□ 3.97
SCO2-204ENST00000543927 ZNF608Q9ULD9 1512 aaPredicted RBP39.7■■■■□ 3.95
SCO2-204ENST00000543927 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
SCO2-204ENST00000543927 TARBP1Q13395 1621 aaKnown RBP39.6■■■■□ 3.93
SCO2-204ENST00000543927 EIF4G3O43432 1585 aaKnown RBP39.53■■■■□ 3.92
SCO2-204ENST00000543927 CUX1P39880 1505 aa39.52■■■■□ 3.92
SCO2-204ENST00000543927 FGD5Q6ZNL6 1462 aa39.44■■■■□ 3.9
SCO2-204ENST00000543927 OSCARQ8IYS5 282 aa39.43■■■■□ 3.9
SCO2-204ENST00000543927 RAD54L2Q9Y4B4 1467 aa39.43■■■■□ 3.9
SCO2-204ENST00000543927 SOGA1O94964 1423 aa39.42■■■■□ 3.9
SCO2-204ENST00000543927 AQRO60306 1485 aaKnown RBP eCLIP39.39■■■■□ 3.91e-6■■□□□ 14.5
SCO2-204ENST00000543927 WDR97A6NE52 1622 aa39.28■■■■□ 3.88
SCO2-204ENST00000543927 TDRD9Q8NDG6 1382 aaKnown RBP39.24■■■■□ 3.87
SCO2-204ENST00000543927 CHD1O14646 1710 aa39.11■■■■□ 3.85
SCO2-204ENST00000543927 WRNQ14191 1432 aaPredicted RBP eCLIP39.08■■■■□ 3.85
SCO2-204ENST00000543927 BIVM-ERCC5R4GMW8 1640 aa39.08■■■■□ 3.85
SCO2-204ENST00000543927 TOP2BQ02880 1626 aa39.07■■■■□ 3.84
SCO2-204ENST00000543927 ABCA10Q8WWZ4 1543 aa39.06■■■■□ 3.84
SCO2-204ENST00000543927 GRIN2BQ13224 1484 aa39.04■■■■□ 3.84
SCO2-204ENST00000543927 SNAPC4Q5SXM2 1469 aa39.04■■■■□ 3.84
SCO2-204ENST00000543927 SYNJ1O43426 1573 aa39.03■■■■□ 3.84
SCO2-204ENST00000543927 MAGI1Q96QZ7 1491 aaPredicted RBP38.98■■■■□ 3.83
SCO2-204ENST00000543927 GAPVD1Q14C86 1478 aa38.97■■■■□ 3.83
SCO2-204ENST00000543927 ABCA5Q8WWZ7 1642 aa38.96■■■■□ 3.83
SCO2-204ENST00000543927 FBLN2P98095 1184 aa38.95■■■■□ 3.83
SCO2-204ENST00000543927 PBRM1Q86U86 1689 aa38.93■■■■□ 3.82
SCO2-204ENST00000543927 TRIM41Q8WV44 630 aa38.9■■■■□ 3.82
SCO2-204ENST00000543927 RIMBP3CA6NJZ7 1639 aa38.88■■■■□ 3.81
SCO2-204ENST00000543927 RIMBP3BA6NNM3 1639 aa38.88■■■■□ 3.81
SCO2-204ENST00000543927 RIMBP3Q9UFD9 1639 aa38.88■■■■□ 3.81
SCO2-204ENST00000543927 SYNJ2O15056 1496 aa38.84■■■■□ 3.81
SCO2-204ENST00000543927 ARHGEF11O15085 1522 aa38.83■■■■□ 3.81
SCO2-204ENST00000543927 CHMP7Q8WUX9 453 aaPredicted RBP38.81■■■■□ 3.8
SCO2-204ENST00000543927 CLASP1Q7Z460 1538 aa38.7■■■■□ 3.79
SCO2-204ENST00000543927 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
SCO2-204ENST00000543927 ERICH3Q5RHP9 1530 aa38.58■■■■□ 3.77
SCO2-204ENST00000543927 GRIN2AQ12879 1464 aa38.53■■■■□ 3.76
SCO2-204ENST00000543927 FHAD1B1AJZ9 1412 aa38.51■■■■□ 3.76
SCO2-204ENST00000543927 ARAP1Q96P48 1450 aa38.49■■■■□ 3.75
SCO2-204ENST00000543927 CYB5RLQ6IPT4 315 aa38.44■■■■□ 3.74
SCO2-204ENST00000543927 NUP160Q12769 1436 aa38.4■■■■□ 3.74
SCO2-204ENST00000543927 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
SCO2-204ENST00000543927 KIF27Q86VH2 1401 aa38.3■■■■□ 3.72
SCO2-204ENST00000543927 IGF1RP08069 1367 aa38.2■■■■□ 3.71
SCO2-204ENST00000543927 SHROOM2Q13796 1616 aa38.16■■■■□ 3.7
SCO2-204ENST00000543927 CUL7Q14999 1698 aa38.14■■■■□ 3.7
SCO2-204ENST00000543927 ERCC6L2Q5T890 1561 aa38.11■■■■□ 3.69
SCO2-204ENST00000543927 RUSC2Q8N2Y8 1516 aa38.05■■■■□ 3.68
SCO2-204ENST00000543927 CARMIL1Q5VZK9 1371 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms