RNA–Protein interactions for RNA: ENST00000479017.5

RPL29-204, Transcript of ribosomal protein L29, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPL29, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL29-204ENST00000479017 NISCHQ9Y2I1 1504 aa50.65■■■■■ 5.7
RPL29-204ENST00000479017 ABCC9O60706 1549 aa47.03■■■■■ 5.12
RPL29-204ENST00000479017 CCDC180Q9P1Z9 1646 aa45.69■■■■■ 4.9
RPL29-204ENST00000479017 DNAJC5BQ9UF47 199 aa45.19■■■■■ 4.82
RPL29-204ENST00000479017 RB1CC1Q8TDY2 1594 aa44.16■■■■■ 4.66
RPL29-204ENST00000479017 PABPN1Q86U42 306 aaKnown RBP eCLIP43.78■■■■■ 4.6
RPL29-204ENST00000479017 NACADO15069 1562 aa43.6■■■■■ 4.57
RPL29-204ENST00000479017 DCAF8L2P0C7V8 631 aa43.58■■■■■ 4.57
RPL29-204ENST00000479017 UNC13AQ9UPW8 1703 aa42.97■■■■■ 4.47
RPL29-204ENST00000479017 BICRAQ9NZM4 1560 aa42.89■■■■■ 4.46
RPL29-204ENST00000479017 MYO15BQ96JP2 1530 aa42.61■■■■■ 4.41
RPL29-204ENST00000479017 CECR2Q9BXF3 1484 aa42.46■■■■■ 4.39
RPL29-204ENST00000479017 CC2D2AQ9P2K1 1620 aa42.31■■■■■ 4.36
RPL29-204ENST00000479017 DNAJC5Q9H3Z4 198 aa42.26■■■■■ 4.36
RPL29-204ENST00000479017 SHROOM4Q9ULL8 1493 aa42.15■■■■■ 4.34
RPL29-204ENST00000479017 EIF4G1Q04637 1599 aaKnown RBP41.96■■■■■ 4.31
RPL29-204ENST00000479017 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
RPL29-204ENST00000479017 ZCCHC6Q5VYS8 1495 aaKnown RBP41.69■■■■■ 4.26
RPL29-204ENST00000479017 DCAF1Q9Y4B6 1507 aa41.68■■■■■ 4.26
RPL29-204ENST00000479017 CUX2O14529 1486 aa40.88■■■■■ 4.13
RPL29-204ENST00000479017 ERCC6Q03468 1493 aa40.69■■■■■ 4.1
RPL29-204ENST00000479017 NCAPD3P42695 1498 aa40.36■■■■■ 4.05
RPL29-204ENST00000479017 ATAD2BQ9ULI0 1458 aa40.08■■■■■ 4.01
RPL29-204ENST00000479017 NESP48681 1621 aa40.07■■■■■ 4.01
RPL29-204ENST00000479017 TRIM41Q8WV44 630 aa40.05■■■■■ 4
RPL29-204ENST00000479017 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
RPL29-204ENST00000479017 HMGXB3Q12766 1538 aa39.82■■■■□ 3.97
RPL29-204ENST00000479017 THOC2Q8NI27 1593 aaKnown RBP39.69■■■■□ 3.94
RPL29-204ENST00000479017 SMARCA4P51532 1647 aa39.65■■■■□ 3.94
RPL29-204ENST00000479017 BAZ1BQ9UIG0 1483 aaKnown RBP39.62■■■■□ 3.93
RPL29-204ENST00000479017 LAMC3Q9Y6N6 1575 aa39.5■■■■□ 3.91
RPL29-204ENST00000479017 PDS5BQ9NTI5 1447 aa39.47■■■■□ 3.91
RPL29-204ENST00000479017 BAZ1AQ9NRL2 1556 aaPredicted RBP39.34■■■■□ 3.89
RPL29-204ENST00000479017 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.89
RPL29-204ENST00000479017 PEG3Q9GZU2 1588 aa39.24■■■■□ 3.87
RPL29-204ENST00000479017 CADPSQ9ULU8 1353 aa39.14■■■■□ 3.86
RPL29-204ENST00000479017 MRC2Q9UBG0 1479 aa39.11■■■■□ 3.85
RPL29-204ENST00000479017 OSCARQ8IYS5 282 aa39.06■■■■□ 3.84
RPL29-204ENST00000479017 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
RPL29-204ENST00000479017 WDR62O43379 1518 aa38.98■■■■□ 3.83
RPL29-204ENST00000479017 CEP164Q9UPV0 1460 aa38.75■■■■□ 3.79
RPL29-204ENST00000479017 FANCD2Q9BXW9 1451 aa38.65■■■■□ 3.78
RPL29-204ENST00000479017 WIZO95785 1651 aa38.45■■■■□ 3.75
RPL29-204ENST00000479017 RIMBP3CA6NJZ7 1639 aa38.4■■■■□ 3.74
RPL29-204ENST00000479017 RIMBP3BA6NNM3 1639 aa38.4■■■■□ 3.74
RPL29-204ENST00000479017 RIMBP3Q9UFD9 1639 aa38.4■■■■□ 3.74
RPL29-204ENST00000479017 CFTRP13569 1480 aa38.4■■■■□ 3.74
RPL29-204ENST00000479017 URB2Q14146 1524 aaKnown RBP38.36■■■■□ 3.73
RPL29-204ENST00000479017 CYB5RLQ6IPT4 315 aa38.27■■■■□ 3.72
RPL29-204ENST00000479017 ARHGEF11O15085 1522 aa38.23■■■■□ 3.71
RPL29-204ENST00000479017 TRHP20396 242 aaPredicted RBP38.21■■■■□ 3.71
RPL29-204ENST00000479017 ZNF608Q9ULD9 1512 aaPredicted RBP38.1■■■■□ 3.69
RPL29-204ENST00000479017 IFT140Q96RY7 1462 aa38.03■■■■□ 3.68
RPL29-204ENST00000479017 RSF1Q96T23 1441 aaPredicted RBP37.9■■■■□ 3.66
RPL29-204ENST00000479017 TOP2AP11388 1531 aaKnown RBP37.88■■■■□ 3.65
RPL29-204ENST00000479017 AEBP2Q6ZN18 517 aaPredicted RBP37.88■■■■□ 3.65
RPL29-204ENST00000479017 FBLN2P98095 1184 aa37.81■■■■□ 3.64
RPL29-204ENST00000479017 ARAP1Q96P48 1450 aa37.79■■■■□ 3.64
RPL29-204ENST00000479017 TOPBP1Q92547 1522 aa37.77■■■■□ 3.64
RPL29-204ENST00000479017 AQRO60306 1485 aaKnown RBP eCLIP37.7■■■■□ 3.639e-9■■■■□ 25.4
RPL29-204ENST00000479017 EIF4G3O43432 1585 aaKnown RBP37.68■■■■□ 3.62
RPL29-204ENST00000479017 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
RPL29-204ENST00000479017 PRDM2Q13029 1718 aa37.61■■■■□ 3.61
RPL29-204ENST00000479017 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
RPL29-204ENST00000479017 CHD1O14646 1710 aa37.56■■■■□ 3.6
RPL29-204ENST00000479017 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
RPL29-204ENST00000479017 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
RPL29-204ENST00000479017 TDRD9Q8NDG6 1382 aaKnown RBP37.34■■■■□ 3.57
RPL29-204ENST00000479017 POLA1P09884 1462 aaPredicted RBP37.32■■■■□ 3.56
RPL29-204ENST00000479017 CHMP7Q8WUX9 453 aaPredicted RBP37.31■■■■□ 3.56
RPL29-204ENST00000479017 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
RPL29-204ENST00000479017 SOGA1O94964 1423 aa37.24■■■■□ 3.55
RPL29-204ENST00000479017 SNAPC4Q5SXM2 1469 aa37.19■■■■□ 3.54
RPL29-204ENST00000479017 CLASP1Q7Z460 1538 aa37.17■■■■□ 3.54
RPL29-204ENST00000479017 SYNJ1O43426 1573 aa37.09■■■■□ 3.53
RPL29-204ENST00000479017 MAGI1Q96QZ7 1491 aaPredicted RBP37.01■■■■□ 3.51
RPL29-204ENST00000479017 GAPVD1Q14C86 1478 aa37■■■■□ 3.51
RPL29-204ENST00000479017 GRIN2BQ13224 1484 aa36.95■■■■□ 3.51
RPL29-204ENST00000479017 SYNJ2O15056 1496 aa36.94■■■■□ 3.5
RPL29-204ENST00000479017 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
RPL29-204ENST00000479017 WDR97A6NE52 1622 aa36.89■■■■□ 3.5
RPL29-204ENST00000479017 CUX1P39880 1505 aa36.71■■■■□ 3.47
RPL29-204ENST00000479017 ERCC6L2Q5T890 1561 aa36.59■■■■□ 3.45
RPL29-204ENST00000479017 PBRM1Q86U86 1689 aa36.52■■■■□ 3.44
RPL29-204ENST00000479017 GRIN2AQ12879 1464 aa36.45■■■■□ 3.43
RPL29-204ENST00000479017 ABCA10Q8WWZ4 1543 aa36.44■■■■□ 3.42
RPL29-204ENST00000479017 CEP170Q5SW79 1584 aa36.42■■■■□ 3.42
RPL29-204ENST00000479017 NUP160Q12769 1436 aa36.37■■■■□ 3.41
RPL29-204ENST00000479017 ABCA5Q8WWZ7 1642 aa36.36■■■■□ 3.41
RPL29-204ENST00000479017 FAM69CQ0P6D2 419 aa36.34■■■■□ 3.41
RPL29-204ENST00000479017 ILDR1Q86SU0 546 aaPredicted RBP36.28■■■■□ 3.4
RPL29-204ENST00000479017 KIF13AQ9H1H9 1805 aa36.27■■■■□ 3.4
RPL29-204ENST00000479017 KDM4FA0A1W2PPD8 638 aa36.25■■■■□ 3.39
RPL29-204ENST00000479017 NPM1P06748 294 aaKnown RBP eCLIP36.23■■■■□ 3.39
RPL29-204ENST00000479017 PRG4Q92954 1404 aaPredicted RBP36.2■■■■□ 3.39
RPL29-204ENST00000479017 SHROOM2Q13796 1616 aa36.19■■■■□ 3.38
RPL29-204ENST00000479017 FHAD1B1AJZ9 1412 aa36.19■■■■□ 3.38
RPL29-204ENST00000479017 JPH4Q96JJ6 628 aa36.19■■■■□ 3.38
RPL29-204ENST00000479017 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
RPL29-204ENST00000479017 WRNQ14191 1432 aaPredicted RBP eCLIP36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms