RNA–Protein interactions for RNA: ENST00000532956.5

SIRT3-215, Transcript of sirtuin 3, humanhuman

TSL 2 BASIC

Gene SIRT3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRT3-215ENST00000532956 NISCHQ9Y2I1 1504 aa53.97■■■■■ 6.23
SIRT3-215ENST00000532956 CCDC180Q9P1Z9 1646 aa48.12■■■■■ 5.29
SIRT3-215ENST00000532956 ABCC9O60706 1549 aa47.71■■■■■ 5.23
SIRT3-215ENST00000532956 RB1CC1Q8TDY2 1594 aa45.6■■■■■ 4.89
SIRT3-215ENST00000532956 DCAF8L2P0C7V8 631 aa45.44■■■■■ 4.86
SIRT3-215ENST00000532956 NACADO15069 1562 aa45.42■■■■■ 4.86
SIRT3-215ENST00000532956 MYO15BQ96JP2 1530 aa44.96■■■■■ 4.79
SIRT3-215ENST00000532956 ZCCHC6Q5VYS8 1495 aaKnown RBP44.85■■■■■ 4.77
SIRT3-215ENST00000532956 DCAF1Q9Y4B6 1507 aa44.59■■■■■ 4.73
SIRT3-215ENST00000532956 PABPN1Q86U42 306 aaKnown RBP eCLIP44.56■■■■■ 4.72
SIRT3-215ENST00000532956 UNC13AQ9UPW8 1703 aa44.47■■■■■ 4.71
SIRT3-215ENST00000532956 DNAJC5BQ9UF47 199 aa44.31■■■■■ 4.68
SIRT3-215ENST00000532956 BICRAQ9NZM4 1560 aa44.24■■■■■ 4.67
SIRT3-215ENST00000532956 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
SIRT3-215ENST00000532956 SHROOM4Q9ULL8 1493 aa43.7■■■■■ 4.59
SIRT3-215ENST00000532956 EIF4G1Q04637 1599 aaKnown RBP43.12■■■■■ 4.49
SIRT3-215ENST00000532956 CC2D2AQ9P2K1 1620 aa43.08■■■■■ 4.49
SIRT3-215ENST00000532956 CECR2Q9BXF3 1484 aa42.93■■■■■ 4.46
SIRT3-215ENST00000532956 SMARCA4P51532 1647 aa41.96■■■■■ 4.31
SIRT3-215ENST00000532956 NCAPD3P42695 1498 aa41.96■■■■■ 4.31
SIRT3-215ENST00000532956 ATAD2BQ9ULI0 1458 aa41.92■■■■■ 4.3
SIRT3-215ENST00000532956 BAZ1AQ9NRL2 1556 aaPredicted RBP41.84■■■■■ 4.29
SIRT3-215ENST00000532956 SMARCA2P51531 1590 aa41.8■■■■■ 4.28
SIRT3-215ENST00000532956 HMGXB3Q12766 1538 aa41.66■■■■■ 4.26
SIRT3-215ENST00000532956 MROH2BQ7Z745 1585 aa41.6■■■■■ 4.25
SIRT3-215ENST00000532956 PEG3Q9GZU2 1588 aa41.54■■■■■ 4.24
SIRT3-215ENST00000532956 BAZ1BQ9UIG0 1483 aaKnown RBP41.53■■■■■ 4.24
SIRT3-215ENST00000532956 ERCC6Q03468 1493 aa41.17■■■■■ 4.18
SIRT3-215ENST00000532956 NESP48681 1621 aa41.13■■■■■ 4.17
SIRT3-215ENST00000532956 WIZO95785 1651 aa41.1■■■■■ 4.17
SIRT3-215ENST00000532956 RSF1Q96T23 1441 aaPredicted RBP40.95■■■■■ 4.15
SIRT3-215ENST00000532956 LAMC3Q9Y6N6 1575 aa40.89■■■■■ 4.14
SIRT3-215ENST00000532956 CUX2O14529 1486 aa40.88■■■■■ 4.13
SIRT3-215ENST00000532956 CADPSQ9ULU8 1353 aa40.74■■■■■ 4.11
SIRT3-215ENST00000532956 PDS5BQ9NTI5 1447 aa40.69■■■■■ 4.1
SIRT3-215ENST00000532956 TOP2AP11388 1531 aaKnown RBP40.63■■■■■ 4.1
SIRT3-215ENST00000532956 THOC2Q8NI27 1593 aaKnown RBP40.55■■■■■ 4.08
SIRT3-215ENST00000532956 KIF21AQ7Z4S6 1674 aa40.54■■■■■ 4.08
SIRT3-215ENST00000532956 CFTRP13569 1480 aa40.36■■■■■ 4.05
SIRT3-215ENST00000532956 DNAJC5Q9H3Z4 198 aa40.29■■■■■ 4.04
SIRT3-215ENST00000532956 MRC2Q9UBG0 1479 aa40.29■■■■■ 4.04
SIRT3-215ENST00000532956 FANCD2Q9BXW9 1451 aa40.26■■■■■ 4.03
SIRT3-215ENST00000532956 CEP164Q9UPV0 1460 aa40.25■■■■■ 4.03
SIRT3-215ENST00000532956 CCDC88BA6NC98 1476 aa40.2■■■■■ 4.03
SIRT3-215ENST00000532956 WDR62O43379 1518 aa40.16■■■■■ 4.02
SIRT3-215ENST00000532956 URB2Q14146 1524 aaKnown RBP39.88■■■■□ 3.97
SIRT3-215ENST00000532956 PRDM2Q13029 1718 aa39.87■■■■□ 3.97
SIRT3-215ENST00000532956 SUPT5HO00267 1087 aaKnown RBP39.62■■■■□ 3.93
SIRT3-215ENST00000532956 TOPBP1Q92547 1522 aa39.55■■■■□ 3.92
SIRT3-215ENST00000532956 ABCC8Q09428 1581 aa39.49■■■■□ 3.91
SIRT3-215ENST00000532956 IFT140Q96RY7 1462 aa39.43■■■■□ 3.9
SIRT3-215ENST00000532956 DNMBPQ6XZF7 1577 aa39.42■■■■□ 3.9
SIRT3-215ENST00000532956 ZNF608Q9ULD9 1512 aaPredicted RBP39.31■■■■□ 3.88
SIRT3-215ENST00000532956 POLA1P09884 1462 aaPredicted RBP39.18■■■■□ 3.86
SIRT3-215ENST00000532956 OSCARQ8IYS5 282 aa39.16■■■■□ 3.86
SIRT3-215ENST00000532956 TARBP1Q13395 1621 aaKnown RBP39.11■■■■□ 3.85
SIRT3-215ENST00000532956 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.84
SIRT3-215ENST00000532956 CUX1P39880 1505 aa39.05■■■■□ 3.84
SIRT3-215ENST00000532956 SOGA1O94964 1423 aa39.05■■■■□ 3.84
SIRT3-215ENST00000532956 AQRO60306 1485 aaKnown RBP eCLIP39.05■■■■□ 3.84
SIRT3-215ENST00000532956 RAD54L2Q9Y4B4 1467 aa39.05■■■■□ 3.84
SIRT3-215ENST00000532956 FGD5Q6ZNL6 1462 aa39.01■■■■□ 3.84
SIRT3-215ENST00000532956 TDRD9Q8NDG6 1382 aaKnown RBP38.9■■■■□ 3.82
SIRT3-215ENST00000532956 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
SIRT3-215ENST00000532956 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
SIRT3-215ENST00000532956 FBLN2P98095 1184 aa38.73■■■■□ 3.79
SIRT3-215ENST00000532956 SNAPC4Q5SXM2 1469 aa38.65■■■■□ 3.78
SIRT3-215ENST00000532956 CHD1O14646 1710 aa38.64■■■■□ 3.78
SIRT3-215ENST00000532956 WRNQ14191 1432 aaPredicted RBP eCLIP38.63■■■■□ 3.78
SIRT3-215ENST00000532956 GRIN2BQ13224 1484 aa38.62■■■■□ 3.77
SIRT3-215ENST00000532956 ABCA10Q8WWZ4 1543 aa38.6■■■■□ 3.77
SIRT3-215ENST00000532956 GAPVD1Q14C86 1478 aa38.56■■■■□ 3.76
SIRT3-215ENST00000532956 MAGI1Q96QZ7 1491 aaPredicted RBP38.55■■■■□ 3.76
SIRT3-215ENST00000532956 TOP2BQ02880 1626 aa38.54■■■■□ 3.76
SIRT3-215ENST00000532956 SYNJ1O43426 1573 aa38.53■■■■□ 3.76
SIRT3-215ENST00000532956 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
SIRT3-215ENST00000532956 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
SIRT3-215ENST00000532956 RIMBP3CA6NJZ7 1639 aa38.51■■■■□ 3.76
SIRT3-215ENST00000532956 RIMBP3BA6NNM3 1639 aa38.51■■■■□ 3.76
SIRT3-215ENST00000532956 RIMBP3Q9UFD9 1639 aa38.51■■■■□ 3.76
SIRT3-215ENST00000532956 ARHGEF11O15085 1522 aa38.47■■■■□ 3.75
SIRT3-215ENST00000532956 ABCA5Q8WWZ7 1642 aa38.45■■■■□ 3.75
SIRT3-215ENST00000532956 SYNJ2O15056 1496 aa38.42■■■■□ 3.74
SIRT3-215ENST00000532956 PBRM1Q86U86 1689 aa38.42■■■■□ 3.74
SIRT3-215ENST00000532956 CLASP1Q7Z460 1538 aa38.26■■■■□ 3.72
SIRT3-215ENST00000532956 CYB5RLQ6IPT4 315 aa38.23■■■■□ 3.71
SIRT3-215ENST00000532956 ARAP1Q96P48 1450 aa38.14■■■■□ 3.7
SIRT3-215ENST00000532956 ADAMTS12P58397 1594 aa38.14■■■■□ 3.7
SIRT3-215ENST00000532956 GRIN2AQ12879 1464 aa38.11■■■■□ 3.69
SIRT3-215ENST00000532956 ERICH3Q5RHP9 1530 aa38.11■■■■□ 3.69
SIRT3-215ENST00000532956 FHAD1B1AJZ9 1412 aa38.1■■■■□ 3.69
SIRT3-215ENST00000532956 NUP160Q12769 1436 aa37.96■■■■□ 3.67
SIRT3-215ENST00000532956 CEP170Q5SW79 1584 aa37.93■■■■□ 3.66
SIRT3-215ENST00000532956 KIF27Q86VH2 1401 aa37.87■■■■□ 3.65
SIRT3-215ENST00000532956 IGF1RP08069 1367 aa37.8■■■■□ 3.64
SIRT3-215ENST00000532956 ERCC6L2Q5T890 1561 aa37.72■■■■□ 3.63
SIRT3-215ENST00000532956 SHROOM2Q13796 1616 aa37.69■■■■□ 3.62
SIRT3-215ENST00000532956 TRHP20396 242 aaPredicted RBP37.64■■■■□ 3.62
SIRT3-215ENST00000532956 JPH4Q96JJ6 628 aa37.63■■■■□ 3.61
SIRT3-215ENST00000532956 CUL7Q14999 1698 aa37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms