RNA–Protein interactions for RNA: ENST00000616166.1

DUX4-206, Transcript of double homeobox 4, humanhuman

APPRIS P2 BASIC

Gene DUX4, Length 1,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4-206ENST00000616166 NISCHQ9Y2I1 1504 aa53.7■■■■■ 6.19
DUX4-206ENST00000616166 CCDC180Q9P1Z9 1646 aa48.06■■■■■ 5.28
DUX4-206ENST00000616166 ABCC9O60706 1549 aa47.71■■■■■ 5.23
DUX4-206ENST00000616166 RB1CC1Q8TDY2 1594 aa45.54■■■■■ 4.88
DUX4-206ENST00000616166 NACADO15069 1562 aa45.33■■■■■ 4.85
DUX4-206ENST00000616166 DCAF8L2P0C7V8 631 aa45.04■■■■■ 4.8
DUX4-206ENST00000616166 MYO15BQ96JP2 1530 aa44.81■■■■■ 4.76
DUX4-206ENST00000616166 UNC13AQ9UPW8 1703 aa44.64■■■■■ 4.74
DUX4-206ENST00000616166 ZCCHC6Q5VYS8 1495 aaKnown RBP44.6■■■■■ 4.73
DUX4-206ENST00000616166 DNAJC5BQ9UF47 199 aa44.48■■■■■ 4.71
DUX4-206ENST00000616166 PABPN1Q86U42 306 aaKnown RBP eCLIP44.43■■■■■ 4.7
DUX4-206ENST00000616166 DCAF1Q9Y4B6 1507 aa44.38■■■■■ 4.69
DUX4-206ENST00000616166 BICRAQ9NZM4 1560 aa44.3■■■■■ 4.68
DUX4-206ENST00000616166 SCRIBQ14160 1630 aa43.81■■■■■ 4.6
DUX4-206ENST00000616166 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
DUX4-206ENST00000616166 CC2D2AQ9P2K1 1620 aa43.14■■■■■ 4.5
DUX4-206ENST00000616166 EIF4G1Q04637 1599 aaKnown RBP43.13■■■■■ 4.5
DUX4-206ENST00000616166 CECR2Q9BXF3 1484 aa42.93■■■■■ 4.46
DUX4-206ENST00000616166 NCAPD3P42695 1498 aa41.84■■■■■ 4.29
DUX4-206ENST00000616166 SMARCA4P51532 1647 aa41.84■■■■■ 4.29
DUX4-206ENST00000616166 ATAD2BQ9ULI0 1458 aa41.78■■■■■ 4.28
DUX4-206ENST00000616166 SMARCA2P51531 1590 aa41.65■■■■■ 4.26
DUX4-206ENST00000616166 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.26
DUX4-206ENST00000616166 HMGXB3Q12766 1538 aa41.58■■■■■ 4.25
DUX4-206ENST00000616166 PEG3Q9GZU2 1588 aa41.44■■■■■ 4.22
DUX4-206ENST00000616166 MROH2BQ7Z745 1585 aa41.4■■■■■ 4.22
DUX4-206ENST00000616166 BAZ1BQ9UIG0 1483 aaKnown RBP41.35■■■■■ 4.21
DUX4-206ENST00000616166 NESP48681 1621 aa41.11■■■■■ 4.17
DUX4-206ENST00000616166 ERCC6Q03468 1493 aa41.1■■■■■ 4.17
DUX4-206ENST00000616166 CUX2O14529 1486 aa40.96■■■■■ 4.15
DUX4-206ENST00000616166 WIZO95785 1651 aa40.94■■■■■ 4.14
DUX4-206ENST00000616166 LAMC3Q9Y6N6 1575 aa40.84■■■■■ 4.13
DUX4-206ENST00000616166 THOC2Q8NI27 1593 aaKnown RBP40.66■■■■■ 4.1
DUX4-206ENST00000616166 RSF1Q96T23 1441 aaPredicted RBP40.64■■■■■ 4.1
DUX4-206ENST00000616166 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
DUX4-206ENST00000616166 CADPSQ9ULU8 1353 aa40.56■■■■■ 4.08
DUX4-206ENST00000616166 PDS5BQ9NTI5 1447 aa40.54■■■■■ 4.08
DUX4-206ENST00000616166 DNAJC5Q9H3Z4 198 aa40.54■■■■■ 4.08
DUX4-206ENST00000616166 TOP2AP11388 1531 aaKnown RBP40.42■■■■■ 4.06
DUX4-206ENST00000616166 MRC2Q9UBG0 1479 aa40.22■■■■■ 4.03
DUX4-206ENST00000616166 CFTRP13569 1480 aa40.19■■■■■ 4.03
DUX4-206ENST00000616166 WDR62O43379 1518 aa40.15■■■■■ 4.02
DUX4-206ENST00000616166 CEP164Q9UPV0 1460 aa40.12■■■■■ 4.01
DUX4-206ENST00000616166 FANCD2Q9BXW9 1451 aa40.11■■■■■ 4.01
DUX4-206ENST00000616166 CCDC88BA6NC98 1476 aa39.94■■■■□ 3.98
DUX4-206ENST00000616166 PRDM2Q13029 1718 aa39.88■■■■□ 3.98
DUX4-206ENST00000616166 URB2Q14146 1524 aaKnown RBP39.81■■■■□ 3.96
DUX4-206ENST00000616166 TOPBP1Q92547 1522 aa39.41■■■■□ 3.9
DUX4-206ENST00000616166 DNMBPQ6XZF7 1577 aa39.3■■■■□ 3.88
DUX4-206ENST00000616166 IFT140Q96RY7 1462 aa39.3■■■■□ 3.88
DUX4-206ENST00000616166 ABCC8Q09428 1581 aa39.28■■■■□ 3.88
DUX4-206ENST00000616166 ZNF608Q9ULD9 1512 aaPredicted RBP39.25■■■■□ 3.87
DUX4-206ENST00000616166 OSCARQ8IYS5 282 aa39.08■■■■□ 3.85
DUX4-206ENST00000616166 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.85
DUX4-206ENST00000616166 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.84
DUX4-206ENST00000616166 POLA1P09884 1462 aaPredicted RBP39.04■■■■□ 3.84
DUX4-206ENST00000616166 SUPT5HO00267 1087 aaKnown RBP39■■■■□ 3.83
DUX4-206ENST00000616166 AQRO60306 1485 aaKnown RBP eCLIP38.91■■■■□ 3.82
DUX4-206ENST00000616166 RAD54L2Q9Y4B4 1467 aa38.89■■■■□ 3.82
DUX4-206ENST00000616166 CUX1P39880 1505 aa38.89■■■■□ 3.82
DUX4-206ENST00000616166 TRIM41Q8WV44 630 aa38.86■■■■□ 3.81
DUX4-206ENST00000616166 FGD5Q6ZNL6 1462 aa38.84■■■■□ 3.81
DUX4-206ENST00000616166 SOGA1O94964 1423 aa38.81■■■■□ 3.8
DUX4-206ENST00000616166 CHD1O14646 1710 aa38.73■■■■□ 3.79
DUX4-206ENST00000616166 TDRD9Q8NDG6 1382 aaKnown RBP38.7■■■■□ 3.79
DUX4-206ENST00000616166 WDR97A6NE52 1622 aa38.65■■■■□ 3.78
DUX4-206ENST00000616166 RIMBP3CA6NJZ7 1639 aa38.64■■■■□ 3.78
DUX4-206ENST00000616166 RIMBP3BA6NNM3 1639 aa38.64■■■■□ 3.78
DUX4-206ENST00000616166 RIMBP3Q9UFD9 1639 aa38.64■■■■□ 3.78
DUX4-206ENST00000616166 ARHGEF11O15085 1522 aa38.55■■■■□ 3.76
DUX4-206ENST00000616166 SNAPC4Q5SXM2 1469 aa38.53■■■■□ 3.76
DUX4-206ENST00000616166 FBLN2P98095 1184 aa38.49■■■■□ 3.75
DUX4-206ENST00000616166 GRIN2BQ13224 1484 aa38.45■■■■□ 3.75
DUX4-206ENST00000616166 MAGI1Q96QZ7 1491 aaPredicted RBP38.42■■■■□ 3.74
DUX4-206ENST00000616166 ABCA10Q8WWZ4 1543 aa38.41■■■■□ 3.74
DUX4-206ENST00000616166 PBRM1Q86U86 1689 aa38.39■■■■□ 3.74
DUX4-206ENST00000616166 ABCA5Q8WWZ7 1642 aa38.37■■■■□ 3.73
DUX4-206ENST00000616166 GAPVD1Q14C86 1478 aa38.36■■■■□ 3.73
DUX4-206ENST00000616166 BIVM-ERCC5R4GMW8 1640 aa38.36■■■■□ 3.73
DUX4-206ENST00000616166 TOP2BQ02880 1626 aa38.33■■■■□ 3.73
DUX4-206ENST00000616166 SYNJ1O43426 1573 aa38.32■■■■□ 3.73
DUX4-206ENST00000616166 WRNQ14191 1432 aaPredicted RBP eCLIP38.3■■■■□ 3.72
DUX4-206ENST00000616166 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
DUX4-206ENST00000616166 CLASP1Q7Z460 1538 aa38.28■■■■□ 3.72
DUX4-206ENST00000616166 CHMP7Q8WUX9 453 aaPredicted RBP38.27■■■■□ 3.72
DUX4-206ENST00000616166 ARAP1Q96P48 1450 aa38.21■■■■□ 3.71
DUX4-206ENST00000616166 CYB5RLQ6IPT4 315 aa38.16■■■■□ 3.7
DUX4-206ENST00000616166 ADAMTS12P58397 1594 aa38.04■■■■□ 3.68
DUX4-206ENST00000616166 GRIN2AQ12879 1464 aa37.98■■■■□ 3.67
DUX4-206ENST00000616166 ERICH3Q5RHP9 1530 aa37.92■■■■□ 3.66
DUX4-206ENST00000616166 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
DUX4-206ENST00000616166 CEP170Q5SW79 1584 aa37.87■■■■□ 3.65
DUX4-206ENST00000616166 NUP160Q12769 1436 aa37.86■■■■□ 3.65
DUX4-206ENST00000616166 ERCC6L2Q5T890 1561 aa37.74■■■■□ 3.63
DUX4-206ENST00000616166 SHROOM2Q13796 1616 aa37.69■■■■□ 3.62
DUX4-206ENST00000616166 TRHP20396 242 aaPredicted RBP37.58■■■■□ 3.61
DUX4-206ENST00000616166 KIF27Q86VH2 1401 aa37.53■■■■□ 3.6
DUX4-206ENST00000616166 IGF1RP08069 1367 aa37.51■■■■□ 3.59
DUX4-206ENST00000616166 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.59
DUX4-206ENST00000616166 CUL7Q14999 1698 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms