Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AC005837.3-201ENST00000612163 286 ntBASIC24.36■■□□□ 1.49
SHISA7A6NL88 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHISA7A6NL88 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.36■■□□□ 1.49
SHISA7A6NL88 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHISA7A6NL88 AC139426.1-201ENST00000568218 2529 ntBASIC24.36■■□□□ 1.49
SHISA7A6NL88 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHISA7A6NL88 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.35■■□□□ 1.49
SHISA7A6NL88 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHISA7A6NL88 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHISA7A6NL88 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHISA7A6NL88 AL512631.2-201ENST00000604634 923 ntBASIC24.35■■□□□ 1.49
SHISA7A6NL88 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SHISA7A6NL88 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHISA7A6NL88 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHISA7A6NL88 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.34■■□□□ 1.49
SHISA7A6NL88 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.34■■□□□ 1.49
SHISA7A6NL88 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.34■■□□□ 1.49
SHISA7A6NL88 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHISA7A6NL88 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.33■■□□□ 1.49
SHISA7A6NL88 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.33■■□□□ 1.49
SHISA7A6NL88 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHISA7A6NL88 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SHISA7A6NL88 AC096631.2-201ENST00000436136 790 ntBASIC24.33■■□□□ 1.49
SHISA7A6NL88 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.33■■□□□ 1.49
SHISA7A6NL88 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.33■■□□□ 1.49
SHISA7A6NL88 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHISA7A6NL88 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.32■■□□□ 1.48
SHISA7A6NL88 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.32■■□□□ 1.48
SHISA7A6NL88 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
SHISA7A6NL88 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHISA7A6NL88 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SHISA7A6NL88 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SHISA7A6NL88 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.32■■□□□ 1.48
SHISA7A6NL88 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHISA7A6NL88 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SHISA7A6NL88 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHISA7A6NL88 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.31■■□□□ 1.48
SHISA7A6NL88 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.31■■□□□ 1.48
SHISA7A6NL88 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHISA7A6NL88 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.3■■□□□ 1.48
SHISA7A6NL88 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHISA7A6NL88 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.3■■□□□ 1.48
SHISA7A6NL88 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SHISA7A6NL88 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHISA7A6NL88 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHISA7A6NL88 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.29■■□□□ 1.48
SHISA7A6NL88 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.29■■□□□ 1.48
SHISA7A6NL88 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHISA7A6NL88 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.29■■□□□ 1.48
SHISA7A6NL88 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SHISA7A6NL88 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHISA7A6NL88 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHISA7A6NL88 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SHISA7A6NL88 MTDHP2-201ENST00000601468 714 ntBASIC24.28■■□□□ 1.48
SHISA7A6NL88 AC011551.1-201ENST00000614101 683 ntBASIC24.28■■□□□ 1.48
SHISA7A6NL88 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
SHISA7A6NL88 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SHISA7A6NL88 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.27■■□□□ 1.48
SHISA7A6NL88 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.27■■□□□ 1.48
SHISA7A6NL88 AL356740.2-201ENST00000601559 647 ntBASIC24.27■■□□□ 1.48
SHISA7A6NL88 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHISA7A6NL88 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.27■■□□□ 1.48
SHISA7A6NL88 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHISA7A6NL88 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHISA7A6NL88 AF131216.4-201ENST00000638924 1588 ntBASIC24.26■■□□□ 1.47
SHISA7A6NL88 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.26■■□□□ 1.47
SHISA7A6NL88 AC133561.4-201ENST00000566112 224 ntBASIC24.26■■□□□ 1.47
SHISA7A6NL88 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.26■■□□□ 1.47
SHISA7A6NL88 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SHISA7A6NL88 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SHISA7A6NL88 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SHISA7A6NL88 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SHISA7A6NL88 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SHISA7A6NL88 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.25■■□□□ 1.47
SHISA7A6NL88 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHISA7A6NL88 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SHISA7A6NL88 AP004609.3-201ENST00000610705 1884 ntBASIC24.24■■□□□ 1.47
SHISA7A6NL88 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHISA7A6NL88 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHISA7A6NL88 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SHISA7A6NL88 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHISA7A6NL88 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHISA7A6NL88 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SHISA7A6NL88 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.22■■□□□ 1.47
SHISA7A6NL88 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.22■■□□□ 1.47
SHISA7A6NL88 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SHISA7A6NL88 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.21■■□□□ 1.47
SHISA7A6NL88 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
SHISA7A6NL88 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHISA7A6NL88 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SHISA7A6NL88 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHISA7A6NL88 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHISA7A6NL88 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.2■■□□□ 1.46
SHISA7A6NL88 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SHISA7A6NL88 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms