Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 UNC93B8-201ENST00000511903 705 ntBASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC3BQ96PB8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 BX664725.1-201ENST00000438252 379 ntBASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 KRT125P-201ENST00000546827 989 ntBASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
LRRC3BQ96PB8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC3BQ96PB8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC3BQ96PB8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
LRRC3BQ96PB8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC3BQ96PB8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 AC142086.6-201ENST00000621154 1765 ntBASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LRRC3BQ96PB8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 AC137630.3-201ENST00000607245 391 ntBASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.76■■□□□ 1.55
LRRC3BQ96PB8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC3BQ96PB8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.75■■□□□ 1.55
LRRC3BQ96PB8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.75■■□□□ 1.55
LRRC3BQ96PB8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.75■■□□□ 1.55
LRRC3BQ96PB8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC3BQ96PB8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC3BQ96PB8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC3BQ96PB8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.74■■□□□ 1.55
LRRC3BQ96PB8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 AC019069.1-201ENST00000610008 1333 ntBASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRRC3BQ96PB8 AC021242.3-201ENST00000607598 1377 ntBASIC24.72■■□□□ 1.55
LRRC3BQ96PB8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.72■■□□□ 1.55
LRRC3BQ96PB8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.72■■□□□ 1.55
LRRC3BQ96PB8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.72■■□□□ 1.55
LRRC3BQ96PB8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.72■■□□□ 1.55
LRRC3BQ96PB8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRRC3BQ96PB8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRRC3BQ96PB8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRC3BQ96PB8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRC3BQ96PB8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRC3BQ96PB8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.7■■□□□ 1.55
LRRC3BQ96PB8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.7■■□□□ 1.54
LRRC3BQ96PB8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.7■■□□□ 1.54
LRRC3BQ96PB8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.7■■□□□ 1.54
LRRC3BQ96PB8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.7■■□□□ 1.54
LRRC3BQ96PB8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRRC3BQ96PB8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRRC3BQ96PB8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.69■■□□□ 1.54
LRRC3BQ96PB8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.69■■□□□ 1.54
LRRC3BQ96PB8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC3BQ96PB8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
LRRC3BQ96PB8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC3BQ96PB8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC3BQ96PB8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.67■■□□□ 1.54
LRRC3BQ96PB8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.67■■□□□ 1.54
LRRC3BQ96PB8 KRT16P3-201ENST00000439127 1283 ntBASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 TSPY9P-201ENST00000440215 945 ntBASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 TSPY11P-201ENST00000442607 1045 ntBASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 AC008406.3-201ENST00000620001 1374 ntBASIC24.66■■□□□ 1.54
LRRC3BQ96PB8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRC3BQ96PB8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.65■■□□□ 1.54
LRRC3BQ96PB8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
LRRC3BQ96PB8 MIR4281-201ENST00000580852 62 ntBASIC24.65■■□□□ 1.54
LRRC3BQ96PB8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms