RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 NISCHQ9Y2I1 1504 aa56.52■■■■■ 6.64
CDK2AP1-201ENST00000261692 CCDC180Q9P1Z9 1646 aa49.84■■■■■ 5.57
CDK2AP1-201ENST00000261692 ABCC9O60706 1549 aa47.94■■■■■ 5.26
CDK2AP1-201ENST00000261692 ZCCHC6Q5VYS8 1495 aaKnown RBP47.27■■■■■ 5.16
CDK2AP1-201ENST00000261692 DCAF8L2P0C7V8 631 aa46.9■■■■■ 5.1
CDK2AP1-201ENST00000261692 DCAF1Q9Y4B6 1507 aa46.84■■■■■ 5.09
CDK2AP1-201ENST00000261692 MYO15BQ96JP2 1530 aa46.74■■■■■ 5.07
CDK2AP1-201ENST00000261692 NACADO15069 1562 aa46.7■■■■■ 5.07
CDK2AP1-201ENST00000261692 RB1CC1Q8TDY2 1594 aa46.53■■■■■ 5.04
CDK2AP1-201ENST00000261692 SCRIBQ14160 1630 aa45.53■■■■■ 4.88
CDK2AP1-201ENST00000261692 UNC13AQ9UPW8 1703 aa45.35■■■■■ 4.85
CDK2AP1-201ENST00000261692 SHROOM4Q9ULL8 1493 aa45.15■■■■■ 4.82
CDK2AP1-201ENST00000261692 BICRAQ9NZM4 1560 aa45.02■■■■■ 4.8
CDK2AP1-201ENST00000261692 PABPN1Q86U42 306 aaKnown RBP eCLIP44.96■■■■■ 4.79
CDK2AP1-201ENST00000261692 CECR2Q9BXF3 1484 aa43.89■■■■■ 4.62
CDK2AP1-201ENST00000261692 EIF4G1Q04637 1599 aaKnown RBP43.81■■■■■ 4.6
CDK2AP1-201ENST00000261692 BAZ1AQ9NRL2 1556 aaPredicted RBP43.78■■■■■ 4.6
CDK2AP1-201ENST00000261692 SMARCA4P51532 1647 aa43.65■■■■■ 4.58
CDK2AP1-201ENST00000261692 MROH2BQ7Z745 1585 aa43.54■■■■■ 4.56
CDK2AP1-201ENST00000261692 RSF1Q96T23 1441 aaPredicted RBP43.4■■■■■ 4.54
CDK2AP1-201ENST00000261692 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
CDK2AP1-201ENST00000261692 SMARCA2P51531 1590 aa43.24■■■■■ 4.51
CDK2AP1-201ENST00000261692 PEG3Q9GZU2 1588 aa43.24■■■■■ 4.51
CDK2AP1-201ENST00000261692 ATAD2BQ9ULI0 1458 aa43.23■■■■■ 4.51
CDK2AP1-201ENST00000261692 DNAJC5BQ9UF47 199 aa43.17■■■■■ 4.5
CDK2AP1-201ENST00000261692 NCAPD3P42695 1498 aa43.09■■■■■ 4.49
CDK2AP1-201ENST00000261692 WIZO95785 1651 aa43.09■■■■■ 4.49
CDK2AP1-201ENST00000261692 SUPT5HO00267 1087 aaKnown RBP42.96■■■■■ 4.47
CDK2AP1-201ENST00000261692 HMGXB3Q12766 1538 aa42.95■■■■■ 4.47
CDK2AP1-201ENST00000261692 BAZ1BQ9UIG0 1483 aaKnown RBP42.94■■■■■ 4.46
CDK2AP1-201ENST00000261692 TOP2AP11388 1531 aaKnown RBP42.74■■■■■ 4.43
CDK2AP1-201ENST00000261692 CCDC88BA6NC98 1476 aa42.23■■■■■ 4.35
CDK2AP1-201ENST00000261692 CADPSQ9ULU8 1353 aa41.9■■■■■ 4.3
CDK2AP1-201ENST00000261692 CFTRP13569 1480 aa41.82■■■■■ 4.29
CDK2AP1-201ENST00000261692 LAMC3Q9Y6N6 1575 aa41.81■■■■■ 4.28
CDK2AP1-201ENST00000261692 NESP48681 1621 aa41.71■■■■■ 4.27
CDK2AP1-201ENST00000261692 PDS5BQ9NTI5 1447 aa41.55■■■■■ 4.24
CDK2AP1-201ENST00000261692 PRDM2Q13029 1718 aa41.47■■■■■ 4.23
CDK2AP1-201ENST00000261692 FANCD2Q9BXW9 1451 aa41.39■■■■■ 4.22
CDK2AP1-201ENST00000261692 ERCC6Q03468 1493 aa41.32■■■■■ 4.2
CDK2AP1-201ENST00000261692 CEP164Q9UPV0 1460 aa41.27■■■■■ 4.2
CDK2AP1-201ENST00000261692 KIF21AQ7Z4S6 1674 aa41.21■■■■■ 4.19
CDK2AP1-201ENST00000261692 MRC2Q9UBG0 1479 aa41.02■■■■■ 4.16
CDK2AP1-201ENST00000261692 WRNQ14191 1432 aaPredicted RBP eCLIP40.93■■■■■ 4.14
CDK2AP1-201ENST00000261692 ABCC8Q09428 1581 aa40.92■■■■■ 4.14
CDK2AP1-201ENST00000261692 THOC2Q8NI27 1593 aaKnown RBP40.9■■■■■ 4.14
CDK2AP1-201ENST00000261692 URB2Q14146 1524 aaKnown RBP40.88■■■■■ 4.13
CDK2AP1-201ENST00000261692 WDR62O43379 1518 aa40.84■■■■■ 4.13
CDK2AP1-201ENST00000261692 DNMBPQ6XZF7 1577 aa40.84■■■■■ 4.13
CDK2AP1-201ENST00000261692 TOPBP1Q92547 1522 aa40.81■■■■■ 4.12
CDK2AP1-201ENST00000261692 CUX1P39880 1505 aa40.8■■■■■ 4.12
CDK2AP1-201ENST00000261692 TOP2BQ02880 1626 aa40.7■■■■■ 4.11
CDK2AP1-201ENST00000261692 SYNJ1O43426 1573 aa40.7■■■■■ 4.11
CDK2AP1-201ENST00000261692 BIVM-ERCC5R4GMW8 1640 aa40.66■■■■■ 4.1
CDK2AP1-201ENST00000261692 CHIC1Q5VXU3 224 aa40.6■■■■■ 4.09
CDK2AP1-201ENST00000261692 TRIM41Q8WV44 630 aa40.58■■■■■ 4.09
CDK2AP1-201ENST00000261692 CUX2O14529 1486 aa40.56■■■■■ 4.08
CDK2AP1-201ENST00000261692 FGD5Q6ZNL6 1462 aa40.55■■■■■ 4.08
CDK2AP1-201ENST00000261692 POLA1P09884 1462 aaPredicted RBP40.53■■■■■ 4.08
CDK2AP1-201ENST00000261692 SOGA1O94964 1423 aa40.4■■■■■ 4.06
CDK2AP1-201ENST00000261692 IFT140Q96RY7 1462 aa40.38■■■■■ 4.05
CDK2AP1-201ENST00000261692 RAD54L2Q9Y4B4 1467 aa40.31■■■■■ 4.04
CDK2AP1-201ENST00000261692 TARBP1Q13395 1621 aaKnown RBP40.26■■■■■ 4.03
CDK2AP1-201ENST00000261692 ABCA10Q8WWZ4 1543 aa40.23■■■■■ 4.03
CDK2AP1-201ENST00000261692 WDR97A6NE52 1622 aa40.11■■■■■ 4.01
CDK2AP1-201ENST00000261692 ZNF608Q9ULD9 1512 aaPredicted RBP40.05■■■■■ 4
CDK2AP1-201ENST00000261692 TDRD9Q8NDG6 1382 aaKnown RBP40.04■■■■■ 4
CDK2AP1-201ENST00000261692 KIF27Q86VH2 1401 aa40.03■■■■■ 4
CDK2AP1-201ENST00000261692 AQRO60306 1485 aaKnown RBP eCLIP39.96■■■■□ 3.99
CDK2AP1-201ENST00000261692 GAPVD1Q14C86 1478 aa39.95■■■■□ 3.99
CDK2AP1-201ENST00000261692 ABCA5Q8WWZ7 1642 aa39.94■■■■□ 3.98
CDK2AP1-201ENST00000261692 EIF4G3O43432 1585 aaKnown RBP39.94■■■■□ 3.98
CDK2AP1-201ENST00000261692 EEA1Q15075 1411 aa39.87■■■■□ 3.97
CDK2AP1-201ENST00000261692 GRIN2BQ13224 1484 aa39.83■■■■□ 3.97
CDK2AP1-201ENST00000261692 RUSC2Q8N2Y8 1516 aa39.81■■■■□ 3.96
CDK2AP1-201ENST00000261692 ERICH3Q5RHP9 1530 aa39.77■■■■□ 3.96
CDK2AP1-201ENST00000261692 PBRM1Q86U86 1689 aa39.72■■■■□ 3.95
CDK2AP1-201ENST00000261692 IGF1RP08069 1367 aa39.72■■■■□ 3.95
CDK2AP1-201ENST00000261692 FAM9AQ8IZU1 332 aaPredicted RBP39.65■■■■□ 3.94
CDK2AP1-201ENST00000261692 MAGI1Q96QZ7 1491 aaPredicted RBP39.65■■■■□ 3.94
CDK2AP1-201ENST00000261692 CSRNP3Q8WYN3 585 aa39.65■■■■□ 3.94
CDK2AP1-201ENST00000261692 SNAPC4Q5SXM2 1469 aa39.64■■■■□ 3.94
CDK2AP1-201ENST00000261692 CUL7Q14999 1698 aa39.55■■■■□ 3.92
CDK2AP1-201ENST00000261692 FHAD1B1AJZ9 1412 aa39.54■■■■□ 3.92
CDK2AP1-201ENST00000261692 CARMIL1Q5VZK9 1371 aa39.53■■■■□ 3.92
CDK2AP1-201ENST00000261692 ADAMTS12P58397 1594 aa39.51■■■■□ 3.92
CDK2AP1-201ENST00000261692 SYNJ2O15056 1496 aa39.47■■■■□ 3.91
CDK2AP1-201ENST00000261692 PRXQ9BXM0 1461 aa39.45■■■■□ 3.91
CDK2AP1-201ENST00000261692 CHMP7Q8WUX9 453 aaPredicted RBP39.42■■■■□ 3.9
CDK2AP1-201ENST00000261692 RAPGEF2Q9Y4G8 1499 aa39.38■■■■□ 3.9
CDK2AP1-201ENST00000261692 FBLN2P98095 1184 aa39.36■■■■□ 3.89
CDK2AP1-201ENST00000261692 GRIN2AQ12879 1464 aa39.31■■■■□ 3.88
CDK2AP1-201ENST00000261692 KIF21BO75037 1637 aa39.3■■■■□ 3.88
CDK2AP1-201ENST00000261692 CHD1O14646 1710 aa39.22■■■■□ 3.87
CDK2AP1-201ENST00000261692 GOLGA3Q08378 1498 aa39.19■■■■□ 3.86
CDK2AP1-201ENST00000261692 NUP160Q12769 1436 aa39.1■■■■□ 3.85
CDK2AP1-201ENST00000261692 OSCARQ8IYS5 282 aa39.07■■■■□ 3.84
CDK2AP1-201ENST00000261692 EHMT2Q96KQ7 1210 aa39.04■■■■□ 3.84
CDK2AP1-201ENST00000261692 CEP170Q5SW79 1584 aa39.02■■■■□ 3.84
CDK2AP1-201ENST00000261692 UBTFP17480 764 aaKnown RBP39.02■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms