Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-7A0A0A0MS04 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-7A0A0A0MS04 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-7A0A0A0MS04 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-7A0A0A0MS04 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 CR559946.2-201ENST00000623684 991 ntBASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV6-7A0A0A0MS04 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 AC126177.7-201ENST00000547904 679 ntBASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-7A0A0A0MS04 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRBV6-7A0A0A0MS04 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRBV6-7A0A0A0MS04 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-7A0A0A0MS04 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-7A0A0A0MS04 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV6-7A0A0A0MS04 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-7A0A0A0MS04 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-7A0A0A0MS04 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-7A0A0A0MS04 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV6-7A0A0A0MS04 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.91■□□□□ 0.78
TRBV6-7A0A0A0MS04 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRBV6-7A0A0A0MS04 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRBV6-7A0A0A0MS04 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRBV6-7A0A0A0MS04 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms