RNA–Protein interactions for RNA: ENST00000375433.3

RCC2-201, Transcript of regulator of chromosome condensation 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC2, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC2-201ENST00000375433 NISCHQ9Y2I1 1504 aa49.89■■■■■ 5.58
RCC2-201ENST00000375433 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
RCC2-201ENST00000375433 ZCCHC6Q5VYS8 1495 aaKnown RBP42.11■■■■■ 4.33
RCC2-201ENST00000375433 SHROOM4Q9ULL8 1493 aa41.61■■■■■ 4.25
RCC2-201ENST00000375433 DCAF1Q9Y4B6 1507 aa41.17■■■■■ 4.18
RCC2-201ENST00000375433 DCAF8L2P0C7V8 631 aa41.05■■■■■ 4.16
RCC2-201ENST00000375433 ABCC9O60706 1549 aa40.55■■■■■ 4.08
RCC2-201ENST00000375433 SUPT5HO00267 1087 aaKnown RBP40.54■■■■■ 4.08
RCC2-201ENST00000375433 MYO15BQ96JP2 1530 aa40.27■■■■■ 4.04
RCC2-201ENST00000375433 NACADO15069 1562 aa39.9■■■■□ 3.98
RCC2-201ENST00000375433 SCRIBQ14160 1630 aa39.77■■■■□ 3.96
RCC2-201ENST00000375433 RB1CC1Q8TDY2 1594 aa39.54■■■■□ 3.92
RCC2-201ENST00000375433 CHIC1Q5VXU3 224 aa39.29■■■■□ 3.88
RCC2-201ENST00000375433 RSF1Q96T23 1441 aaPredicted RBP39.15■■■■□ 3.86
RCC2-201ENST00000375433 UNC13AQ9UPW8 1703 aa38.9■■■■□ 3.82
RCC2-201ENST00000375433 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.79
RCC2-201ENST00000375433 MROH2BQ7Z745 1585 aa38.63■■■■□ 3.77
RCC2-201ENST00000375433 BAZ1AQ9NRL2 1556 aaPredicted RBP38.42■■■■□ 3.74
RCC2-201ENST00000375433 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
RCC2-201ENST00000375433 WIZO95785 1651 aa38.38■■■■□ 3.73
RCC2-201ENST00000375433 PABPN1Q86U42 306 aaKnown RBP eCLIP38.31■■■■□ 3.72
RCC2-201ENST00000375433 SMARCA4P51532 1647 aa38.13■■■■□ 3.69
RCC2-201ENST00000375433 TRIM41Q8WV44 630 aa37.98■■■■□ 3.67
RCC2-201ENST00000375433 TOP2AP11388 1531 aaKnown RBP37.94■■■■□ 3.66
RCC2-201ENST00000375433 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
RCC2-201ENST00000375433 EIF4G1Q04637 1599 aaKnown RBP37.74■■■■□ 3.63
RCC2-201ENST00000375433 SMARCA2P51531 1590 aa37.64■■■■□ 3.62
RCC2-201ENST00000375433 CCDC88BA6NC98 1476 aa37.63■■■■□ 3.61
RCC2-201ENST00000375433 PEG3Q9GZU2 1588 aa37.58■■■■□ 3.61
RCC2-201ENST00000375433 FAM9AQ8IZU1 332 aaPredicted RBP37.4■■■■□ 3.58
RCC2-201ENST00000375433 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
RCC2-201ENST00000375433 PCGF6Q9BYE7 350 aa37.26■■■■□ 3.56
RCC2-201ENST00000375433 ABCC8Q09428 1581 aa37.21■■■■□ 3.55
RCC2-201ENST00000375433 BAZ1BQ9UIG0 1483 aaKnown RBP37.12■■■■□ 3.53
RCC2-201ENST00000375433 HRCP23327 699 aa36.98■■■■□ 3.51
RCC2-201ENST00000375433 TRIM26Q12899 539 aaPredicted RBP36.93■■■■□ 3.5
RCC2-201ENST00000375433 EHMT2Q96KQ7 1210 aa36.9■■■■□ 3.5
RCC2-201ENST00000375433 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
RCC2-201ENST00000375433 WRNQ14191 1432 aaPredicted RBP eCLIP36.81■■■■□ 3.48
RCC2-201ENST00000375433 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
RCC2-201ENST00000375433 EEA1Q15075 1411 aa36.76■■■■□ 3.48
RCC2-201ENST00000375433 SOGA1O94964 1423 aa36.74■■■■□ 3.47
RCC2-201ENST00000375433 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
RCC2-201ENST00000375433 SYNJ1O43426 1573 aa36.62■■■■□ 3.45
RCC2-201ENST00000375433 CSRNP3Q8WYN3 585 aa36.55■■■■□ 3.44
RCC2-201ENST00000375433 RUSC2Q8N2Y8 1516 aa36.55■■■■□ 3.44
RCC2-201ENST00000375433 TNIKQ9UKE5 1360 aa36.44■■■■□ 3.42
RCC2-201ENST00000375433 CEP162Q5TB80 1403 aa36.36■■■■□ 3.41
RCC2-201ENST00000375433 GOLGA3Q08378 1498 aa36.36■■■■□ 3.41
RCC2-201ENST00000375433 TOP2BQ02880 1626 aa36.35■■■■□ 3.41
RCC2-201ENST00000375433 BIVM-ERCC5R4GMW8 1640 aa36.27■■■■□ 3.4
RCC2-201ENST00000375433 KIF21BO75037 1637 aa36.25■■■■□ 3.39
RCC2-201ENST00000375433 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
RCC2-201ENST00000375433 CFTRP13569 1480 aa36.23■■■■□ 3.39
RCC2-201ENST00000375433 UBTFP17480 764 aaKnown RBP36.22■■■■□ 3.39
RCC2-201ENST00000375433 PPARGC1BQ86YN6 1023 aaKnown RBP36.08■■■■□ 3.37
RCC2-201ENST00000375433 CUX1P39880 1505 aa36.04■■■■□ 3.36
RCC2-201ENST00000375433 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
RCC2-201ENST00000375433 ZEB1P37275 1124 aaPredicted RBP35.95■■■■□ 3.35
RCC2-201ENST00000375433 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
RCC2-201ENST00000375433 CADPSQ9ULU8 1353 aa35.93■■■■□ 3.34
RCC2-201ENST00000375433 CLIP1P30622 1438 aa35.83■■■■□ 3.33
RCC2-201ENST00000375433 ERICH3Q5RHP9 1530 aa35.81■■■■□ 3.32
RCC2-201ENST00000375433 DNAJC5BQ9UF47 199 aa35.8■■■■□ 3.32
RCC2-201ENST00000375433 PRXQ9BXM0 1461 aa35.79■■■■□ 3.32
RCC2-201ENST00000375433 KIF27Q86VH2 1401 aa35.77■■■■□ 3.32
RCC2-201ENST00000375433 NESP48681 1621 aa35.68■■■■□ 3.3
RCC2-201ENST00000375433 VPS8Q8N3P4 1428 aa35.65■■■■□ 3.3
RCC2-201ENST00000375433 TTBK1Q5TCY1 1321 aaPredicted RBP35.59■■■■□ 3.29
RCC2-201ENST00000375433 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
RCC2-201ENST00000375433 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
RCC2-201ENST00000375433 FGD5Q6ZNL6 1462 aa35.49■■■■□ 3.27
RCC2-201ENST00000375433 CUX2O14529 1486 aa35.47■■■■□ 3.27
RCC2-201ENST00000375433 RANGAP1P46060 587 aaPredicted RBP35.41■■■■□ 3.26
RCC2-201ENST00000375433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.38■■■■□ 3.25
RCC2-201ENST00000375433 IGF1RP08069 1367 aa35.37■■■■□ 3.25
RCC2-201ENST00000375433 APLP2Q06481 763 aa35.37■■■■□ 3.25
RCC2-201ENST00000375433 DNMBPQ6XZF7 1577 aa35.35■■■■□ 3.25
RCC2-201ENST00000375433 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
RCC2-201ENST00000375433 CCER1Q8TC90 406 aaPredicted RBP35.33■■■■□ 3.25
RCC2-201ENST00000375433 PDS5BQ9NTI5 1447 aa35.27■■■■□ 3.24
RCC2-201ENST00000375433 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
RCC2-201ENST00000375433 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
RCC2-201ENST00000375433 CARMIL1Q5VZK9 1371 aa35.21■■■■□ 3.23
RCC2-201ENST00000375433 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
RCC2-201ENST00000375433 ABCA10Q8WWZ4 1543 aa35.17■■■■□ 3.22
RCC2-201ENST00000375433 ARHGAP35Q9NRY4 1499 aa35.16■■■■□ 3.22
RCC2-201ENST00000375433 URB2Q14146 1524 aaKnown RBP35.14■■■■□ 3.22
RCC2-201ENST00000375433 RAD54L2Q9Y4B4 1467 aa35.1■■■■□ 3.21
RCC2-201ENST00000375433 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
RCC2-201ENST00000375433 CUL7Q14999 1698 aa34.93■■■■□ 3.18
RCC2-201ENST00000375433 WDR97A6NE52 1622 aa34.93■■■■□ 3.18
RCC2-201ENST00000375433 KANK4Q5T7N3 995 aaPredicted RBP34.91■■■■□ 3.18
RCC2-201ENST00000375433 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
RCC2-201ENST00000375433 MAP3K1Q13233 1512 aa34.79■■■■□ 3.16
RCC2-201ENST00000375433 ABCA5Q8WWZ7 1642 aa34.78■■■■□ 3.16
RCC2-201ENST00000375433 RRBP1Q9P2E9 1410 aaKnown RBP34.76■■■■□ 3.15
RCC2-201ENST00000375433 FHAD1B1AJZ9 1412 aa34.74■■■■□ 3.15
RCC2-201ENST00000375433 TIAM1Q13009 1591 aa34.72■■■■□ 3.15
RCC2-201ENST00000375433 CTTNBP2Q8WZ74 1663 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms