RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 NISCHQ9Y2I1 1504 aa50.02■■■■■ 5.6
R3HDM4-201ENST00000361574 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.51
R3HDM4-201ENST00000361574 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
R3HDM4-201ENST00000361574 DCAF1Q9Y4B6 1507 aa41.45■■■■■ 4.23
R3HDM4-201ENST00000361574 SHROOM4Q9ULL8 1493 aa41.31■■■■■ 4.2
R3HDM4-201ENST00000361574 DCAF8L2P0C7V8 631 aa40.7■■■■■ 4.11
R3HDM4-201ENST00000361574 MYO15BQ96JP2 1530 aa40.59■■■■■ 4.09
R3HDM4-201ENST00000361574 SUPT5HO00267 1087 aaKnown RBP40.23■■■■■ 4.03
R3HDM4-201ENST00000361574 NACADO15069 1562 aa39.96■■■■□ 3.99
R3HDM4-201ENST00000361574 ABCC9O60706 1549 aa39.78■■■■□ 3.96
R3HDM4-201ENST00000361574 SCRIBQ14160 1630 aa39.75■■■■□ 3.95
R3HDM4-201ENST00000361574 RB1CC1Q8TDY2 1594 aa39.34■■■■□ 3.89
R3HDM4-201ENST00000361574 CHIC1Q5VXU3 224 aa39.18■■■■□ 3.86
R3HDM4-201ENST00000361574 RSF1Q96T23 1441 aaPredicted RBP39.17■■■■□ 3.86
R3HDM4-201ENST00000361574 CECR2Q9BXF3 1484 aa38.74■■■■□ 3.79
R3HDM4-201ENST00000361574 UNC13AQ9UPW8 1703 aa38.67■■■■□ 3.78
R3HDM4-201ENST00000361574 MROH2BQ7Z745 1585 aa38.66■■■■□ 3.78
R3HDM4-201ENST00000361574 BAZ1AQ9NRL2 1556 aaPredicted RBP38.53■■■■□ 3.76
R3HDM4-201ENST00000361574 WIZO95785 1651 aa38.4■■■■□ 3.74
R3HDM4-201ENST00000361574 SMARCA4P51532 1647 aa38.24■■■■□ 3.71
R3HDM4-201ENST00000361574 BICRAQ9NZM4 1560 aa38.21■■■■□ 3.71
R3HDM4-201ENST00000361574 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
R3HDM4-201ENST00000361574 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
R3HDM4-201ENST00000361574 PEG3Q9GZU2 1588 aa37.81■■■■□ 3.64
R3HDM4-201ENST00000361574 TRIM41Q8WV44 630 aa37.8■■■■□ 3.64
R3HDM4-201ENST00000361574 SMARCA2P51531 1590 aa37.73■■■■□ 3.63
R3HDM4-201ENST00000361574 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.624e-10■□□□□ 11.2
R3HDM4-201ENST00000361574 CCDC88BA6NC98 1476 aa37.65■■■■□ 3.62
R3HDM4-201ENST00000361574 LOC105371045A0A1W2PR82 267 aa37.64■■■■□ 3.62
R3HDM4-201ENST00000361574 ATAD2BQ9ULI0 1458 aa37.34■■■■□ 3.57
R3HDM4-201ENST00000361574 BAZ1BQ9UIG0 1483 aaKnown RBP37.15■■■■□ 3.54
R3HDM4-201ENST00000361574 ABCC8Q09428 1581 aa37.15■■■■□ 3.54
R3HDM4-201ENST00000361574 FAM9AQ8IZU1 332 aaPredicted RBP37.06■■■■□ 3.52
R3HDM4-201ENST00000361574 PCGF6Q9BYE7 350 aa36.94■■■■□ 3.5
R3HDM4-201ENST00000361574 HMGXB3Q12766 1538 aa36.93■■■■□ 3.5
R3HDM4-201ENST00000361574 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
R3HDM4-201ENST00000361574 EEA1Q15075 1411 aa36.87■■■■□ 3.49
R3HDM4-201ENST00000361574 HRCP23327 699 aa36.82■■■■□ 3.48
R3HDM4-201ENST00000361574 WRNQ14191 1432 aaPredicted RBP eCLIP36.81■■■■□ 3.48
R3HDM4-201ENST00000361574 TRIM26Q12899 539 aaPredicted RBP36.79■■■■□ 3.48
R3HDM4-201ENST00000361574 SOGA1O94964 1423 aa36.66■■■■□ 3.46
R3HDM4-201ENST00000361574 SYNJ1O43426 1573 aa36.65■■■■□ 3.46
R3HDM4-201ENST00000361574 CSRNP3Q8WYN3 585 aa36.48■■■■□ 3.43
R3HDM4-201ENST00000361574 TNIKQ9UKE5 1360 aa36.47■■■■□ 3.43
R3HDM4-201ENST00000361574 RUSC2Q8N2Y8 1516 aa36.47■■■■□ 3.43
R3HDM4-201ENST00000361574 TOP2BQ02880 1626 aa36.45■■■■□ 3.43
R3HDM4-201ENST00000361574 BIVM-ERCC5R4GMW8 1640 aa36.43■■■■□ 3.42
R3HDM4-201ENST00000361574 EHMT2Q96KQ7 1210 aa36.41■■■■□ 3.42
R3HDM4-201ENST00000361574 KIF21BO75037 1637 aa36.36■■■■□ 3.41
R3HDM4-201ENST00000361574 GOLGA3Q08378 1498 aa36.35■■■■□ 3.41
R3HDM4-201ENST00000361574 CFTRP13569 1480 aa36.33■■■■□ 3.41
R3HDM4-201ENST00000361574 CEP162Q5TB80 1403 aa36.3■■■■□ 3.4
R3HDM4-201ENST00000361574 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
R3HDM4-201ENST00000361574 CEP164Q9UPV0 1460 aa36.26■■■■□ 3.4
R3HDM4-201ENST00000361574 CC2D2AQ9P2K1 1620 aa36.1■■■■□ 3.37
R3HDM4-201ENST00000361574 CUX1P39880 1505 aa36.09■■■■□ 3.37
R3HDM4-201ENST00000361574 UBTFP17480 764 aaKnown RBP36.01■■■■□ 3.35
R3HDM4-201ENST00000361574 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
R3HDM4-201ENST00000361574 ERICH3Q5RHP9 1530 aa35.93■■■■□ 3.34
R3HDM4-201ENST00000361574 RAPGEF2Q9Y4G8 1499 aa35.88■■■■□ 3.33
R3HDM4-201ENST00000361574 ZEB1P37275 1124 aaPredicted RBP35.87■■■■□ 3.33
R3HDM4-201ENST00000361574 PRXQ9BXM0 1461 aa35.87■■■■□ 3.33
R3HDM4-201ENST00000361574 CLIP1P30622 1438 aa35.78■■■■□ 3.32
R3HDM4-201ENST00000361574 KIF27Q86VH2 1401 aa35.78■■■■□ 3.32
R3HDM4-201ENST00000361574 PPARGC1BQ86YN6 1023 aaKnown RBP35.69■■■■□ 3.3
R3HDM4-201ENST00000361574 VPS8Q8N3P4 1428 aa35.65■■■■□ 3.3
R3HDM4-201ENST00000361574 FANCD2Q9BXW9 1451 aa35.55■■■■□ 3.28
R3HDM4-201ENST00000361574 FGD5Q6ZNL6 1462 aa35.5■■■■□ 3.27
R3HDM4-201ENST00000361574 DNMBPQ6XZF7 1577 aa35.46■■■■□ 3.27
R3HDM4-201ENST00000361574 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.27
R3HDM4-201ENST00000361574 CUX2O14529 1486 aa35.44■■■■□ 3.26
R3HDM4-201ENST00000361574 IGF1RP08069 1367 aa35.38■■■■□ 3.25
R3HDM4-201ENST00000361574 ARAP1Q96P48 1450 aa35.36■■■■□ 3.25
R3HDM4-201ENST00000361574 TOPBP1Q92547 1522 aa35.31■■■■□ 3.24
R3HDM4-201ENST00000361574 NESP48681 1621 aa35.28■■■■□ 3.24
R3HDM4-201ENST00000361574 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
R3HDM4-201ENST00000361574 POLA1P09884 1462 aaPredicted RBP35.2■■■■□ 3.23
R3HDM4-201ENST00000361574 CARMIL1Q5VZK9 1371 aa35.2■■■■□ 3.22
R3HDM4-201ENST00000361574 APLP2Q06481 763 aa35.16■■■■□ 3.22
R3HDM4-201ENST00000361574 ARHGAP35Q9NRY4 1499 aa35.16■■■■□ 3.22
R3HDM4-201ENST00000361574 TTBK1Q5TCY1 1321 aaPredicted RBP35.14■■■■□ 3.22
R3HDM4-201ENST00000361574 WDR97A6NE52 1622 aa35.11■■■■□ 3.21
R3HDM4-201ENST00000361574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.09■■■■□ 3.21
R3HDM4-201ENST00000361574 URB2Q14146 1524 aaKnown RBP35.08■■■■□ 3.21
R3HDM4-201ENST00000361574 PDS5BQ9NTI5 1447 aa35.08■■■■□ 3.21
R3HDM4-201ENST00000361574 CCER1Q8TC90 406 aaPredicted RBP35.07■■■■□ 3.2
R3HDM4-201ENST00000361574 CUL7Q14999 1698 aa35.07■■■■□ 3.2
R3HDM4-201ENST00000361574 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
R3HDM4-201ENST00000361574 RANGAP1P46060 587 aaPredicted RBP35■■■■□ 3.19
R3HDM4-201ENST00000361574 MAP3K1Q13233 1512 aa34.95■■■■□ 3.19
R3HDM4-201ENST00000361574 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
R3HDM4-201ENST00000361574 ABCA5Q8WWZ7 1642 aa34.91■■■■□ 3.18
R3HDM4-201ENST00000361574 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
R3HDM4-201ENST00000361574 CTTNBP2Q8WZ74 1663 aa34.82■■■■□ 3.16
R3HDM4-201ENST00000361574 EFCAB5A4FU69 1503 aa34.81■■■■□ 3.16
R3HDM4-201ENST00000361574 RRBP1Q9P2E9 1410 aaKnown RBP34.8■■■■□ 3.16
R3HDM4-201ENST00000361574 KANK4Q5T7N3 995 aaPredicted RBP34.77■■■■□ 3.16
R3HDM4-201ENST00000361574 FHAD1B1AJZ9 1412 aa34.76■■■■□ 3.15
R3HDM4-201ENST00000361574 TIAM1Q13009 1591 aa34.75■■■■□ 3.15
R3HDM4-201ENST00000361574 TARBP1Q13395 1621 aaKnown RBP34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms