Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IGHV3-43A0A0B4J1X8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.89■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
IGHV3-43A0A0B4J1X8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.88■□□□□ 0.77
IGHV3-43A0A0B4J1X8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
IGHV3-43A0A0B4J1X8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
IGHV3-43A0A0B4J1X8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IGHV3-43A0A0B4J1X8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.87■□□□□ 0.77
IGHV3-43A0A0B4J1X8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IGHV3-43A0A0B4J1X8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 AC025884.2-201ENST00000553429 711 ntBASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 AC092296.2-201ENST00000589470 999 ntBASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 SMPD5-203ENST00000639008 1464 ntBASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
IGHV3-43A0A0B4J1X8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 MIR4449-201ENST00000578365 66 ntBASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV3-43A0A0B4J1X8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV3-43A0A0B4J1X8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.83■□□□□ 0.77
IGHV3-43A0A0B4J1X8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IGHV3-43A0A0B4J1X8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IGHV3-43A0A0B4J1X8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IGHV3-43A0A0B4J1X8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 MIR3960-201ENST00000583311 91 ntBASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IGHV3-43A0A0B4J1X8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IGHV3-43A0A0B4J1X8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
IGHV3-43A0A0B4J1X8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IGHV3-43A0A0B4J1X8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.81■□□□□ 0.76
IGHV3-43A0A0B4J1X8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGHV3-43A0A0B4J1X8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 GPX1-201ENST00000419349 1106 ntBASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 ECEL1P2-201ENST00000461596 1295 ntBASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
IGHV3-43A0A0B4J1X8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IGHV3-43A0A0B4J1X8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGHV3-43A0A0B4J1X8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
IGHV3-43A0A0B4J1X8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGHV3-43A0A0B4J1X8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
IGHV3-43A0A0B4J1X8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
IGHV3-43A0A0B4J1X8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IGHV3-43A0A0B4J1X8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IGHV3-43A0A0B4J1X8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms