RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 NISCHQ9Y2I1 1504 aa51.52■■■■■ 5.84
MBD3-202ENST00000434436 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.69
MBD3-202ENST00000434436 ZCCHC6Q5VYS8 1495 aaKnown RBP43.46■■■■■ 4.55
MBD3-202ENST00000434436 SHROOM4Q9ULL8 1493 aa43.01■■■■■ 4.48
MBD3-202ENST00000434436 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
MBD3-202ENST00000434436 DCAF1Q9Y4B6 1507 aa42.44■■■■■ 4.38
MBD3-202ENST00000434436 SUPT5HO00267 1087 aaKnown RBP41.83■■■■■ 4.29
MBD3-202ENST00000434436 MYO15BQ96JP2 1530 aa41.53■■■■■ 4.24
MBD3-202ENST00000434436 ABCC9O60706 1549 aa41.32■■■■■ 4.21
MBD3-202ENST00000434436 SCRIBQ14160 1630 aa41.14■■■■■ 4.18
MBD3-202ENST00000434436 NACADO15069 1562 aa41.07■■■■■ 4.17
MBD3-202ENST00000434436 RB1CC1Q8TDY2 1594 aa40.52■■■■■ 4.08
MBD3-202ENST00000434436 CHIC1Q5VXU3 224 aa40.49■■■■■ 4.07
MBD3-202ENST00000434436 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
MBD3-202ENST00000434436 CECR2Q9BXF3 1484 aa40.11■■■■■ 4.01
MBD3-202ENST00000434436 MROH2BQ7Z745 1585 aa39.95■■■■□ 3.99
MBD3-202ENST00000434436 UNC13AQ9UPW8 1703 aa39.93■■■■□ 3.98
MBD3-202ENST00000434436 WIZO95785 1651 aa39.7■■■■□ 3.95
MBD3-202ENST00000434436 BAZ1AQ9NRL2 1556 aaPredicted RBP39.64■■■■□ 3.94
MBD3-202ENST00000434436 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
MBD3-202ENST00000434436 SMARCA4P51532 1647 aa39.41■■■■□ 3.9
MBD3-202ENST00000434436 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.873e-6■■■□□ 17.7
MBD3-202ENST00000434436 TOP2AP11388 1531 aaKnown RBP39.16■■■■□ 3.86
MBD3-202ENST00000434436 TRIM41Q8WV44 630 aa39.13■■■■□ 3.85
MBD3-202ENST00000434436 LOC105371045A0A1W2PR82 267 aa39.12■■■■□ 3.85
MBD3-202ENST00000434436 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
MBD3-202ENST00000434436 SMARCA2P51531 1590 aa38.89■■■■□ 3.82
MBD3-202ENST00000434436 CCDC88BA6NC98 1476 aa38.88■■■■□ 3.81
MBD3-202ENST00000434436 PEG3Q9GZU2 1588 aa38.79■■■■□ 3.8
MBD3-202ENST00000434436 FAM9AQ8IZU1 332 aaPredicted RBP38.62■■■■□ 3.77
MBD3-202ENST00000434436 ATAD2BQ9ULI0 1458 aa38.53■■■■□ 3.76
MBD3-202ENST00000434436 ABCC8Q09428 1581 aa38.47■■■■□ 3.75
MBD3-202ENST00000434436 BAZ1BQ9UIG0 1483 aaKnown RBP38.34■■■■□ 3.73
MBD3-202ENST00000434436 PCGF6Q9BYE7 350 aa38.31■■■■□ 3.72
MBD3-202ENST00000434436 EHMT2Q96KQ7 1210 aa38.17■■■■□ 3.7
MBD3-202ENST00000434436 WRNQ14191 1432 aaPredicted RBP eCLIP37.97■■■■□ 3.675e-6■■■■■ 46
MBD3-202ENST00000434436 NCAPD3P42695 1498 aa37.96■■■■□ 3.67
MBD3-202ENST00000434436 HMGXB3Q12766 1538 aa37.95■■■■□ 3.67
MBD3-202ENST00000434436 SOGA1O94964 1423 aa37.94■■■■□ 3.66
MBD3-202ENST00000434436 HRCP23327 699 aa37.93■■■■□ 3.66
MBD3-202ENST00000434436 TRIM26Q12899 539 aaPredicted RBP37.91■■■■□ 3.66
MBD3-202ENST00000434436 SYNJ1O43426 1573 aa37.85■■■■□ 3.65
MBD3-202ENST00000434436 EEA1Q15075 1411 aa37.8■■■■□ 3.64
MBD3-202ENST00000434436 RUSC2Q8N2Y8 1516 aa37.8■■■■□ 3.64
MBD3-202ENST00000434436 CSRNP3Q8WYN3 585 aa37.67■■■■□ 3.62
MBD3-202ENST00000434436 TNIKQ9UKE5 1360 aa37.52■■■■□ 3.6
MBD3-202ENST00000434436 TOP2BQ02880 1626 aa37.52■■■■□ 3.6
MBD3-202ENST00000434436 CEP162Q5TB80 1403 aa37.46■■■■□ 3.59
MBD3-202ENST00000434436 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
MBD3-202ENST00000434436 GOLGA3Q08378 1498 aa37.44■■■■□ 3.58
MBD3-202ENST00000434436 CFTRP13569 1480 aa37.43■■■■□ 3.58
MBD3-202ENST00000434436 KIF21BO75037 1637 aa37.35■■■■□ 3.57
MBD3-202ENST00000434436 CC2D2AQ9P2K1 1620 aa37.34■■■■□ 3.57
MBD3-202ENST00000434436 UBTFP17480 764 aaKnown RBP37.34■■■■□ 3.57
MBD3-202ENST00000434436 CEP164Q9UPV0 1460 aa37.32■■■■□ 3.56
MBD3-202ENST00000434436 PPARGC1BQ86YN6 1023 aaKnown RBP37.27■■■■□ 3.56
MBD3-202ENST00000434436 CUX1P39880 1505 aa37.26■■■■□ 3.56
MBD3-202ENST00000434436 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
MBD3-202ENST00000434436 CADPSQ9ULU8 1353 aa37.1■■■■□ 3.53
MBD3-202ENST00000434436 RAPGEF2Q9Y4G8 1499 aa37.09■■■■□ 3.53
MBD3-202ENST00000434436 CLIP1P30622 1438 aa36.92■■■■□ 3.5
MBD3-202ENST00000434436 PRXQ9BXM0 1461 aa36.91■■■■□ 3.5
MBD3-202ENST00000434436 ERICH3Q5RHP9 1530 aa36.88■■■■□ 3.49
MBD3-202ENST00000434436 KIF27Q86VH2 1401 aa36.88■■■■□ 3.49
MBD3-202ENST00000434436 ZEB1P37275 1124 aaPredicted RBP36.78■■■■□ 3.48
MBD3-202ENST00000434436 TTBK1Q5TCY1 1321 aaPredicted RBP36.77■■■■□ 3.48
MBD3-202ENST00000434436 FANCD2Q9BXW9 1451 aa36.73■■■■□ 3.47
MBD3-202ENST00000434436 VPS8Q8N3P4 1428 aa36.71■■■■□ 3.47
MBD3-202ENST00000434436 FGD5Q6ZNL6 1462 aa36.68■■■■□ 3.46
MBD3-202ENST00000434436 CUX2O14529 1486 aa36.64■■■■□ 3.46
MBD3-202ENST00000434436 NESP48681 1621 aa36.63■■■■□ 3.45
MBD3-202ENST00000434436 RANGAP1P46060 587 aaPredicted RBP36.61■■■■□ 3.45
MBD3-202ENST00000434436 IGF1RP08069 1367 aa36.53■■■■□ 3.44
MBD3-202ENST00000434436 DNMBPQ6XZF7 1577 aa36.52■■■■□ 3.44
MBD3-202ENST00000434436 ARAP1Q96P48 1450 aa36.48■■■■□ 3.43
MBD3-202ENST00000434436 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
MBD3-202ENST00000434436 TOPBP1Q92547 1522 aa36.45■■■■□ 3.42
MBD3-202ENST00000434436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.43■■■■□ 3.42
MBD3-202ENST00000434436 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
MBD3-202ENST00000434436 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
MBD3-202ENST00000434436 APLP2Q06481 763 aa36.35■■■■□ 3.41
MBD3-202ENST00000434436 CARMIL1Q5VZK9 1371 aa36.35■■■■□ 3.41
MBD3-202ENST00000434436 RAD54L2Q9Y4B4 1467 aa36.34■■■■□ 3.41
MBD3-202ENST00000434436 ABCA10Q8WWZ4 1543 aa36.31■■■■□ 3.4
MBD3-202ENST00000434436 CCER1Q8TC90 406 aaPredicted RBP36.3■■■■□ 3.4
MBD3-202ENST00000434436 ARHGAP35Q9NRY4 1499 aa36.28■■■■□ 3.4
MBD3-202ENST00000434436 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
MBD3-202ENST00000434436 PDS5BQ9NTI5 1447 aa36.18■■■■□ 3.38
MBD3-202ENST00000434436 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
MBD3-202ENST00000434436 KIF21AQ7Z4S6 1674 aa36.12■■■■□ 3.37
MBD3-202ENST00000434436 KANK4Q5T7N3 995 aaPredicted RBP36.04■■■■□ 3.36
MBD3-202ENST00000434436 CUL7Q14999 1698 aa36.04■■■■□ 3.36
MBD3-202ENST00000434436 HNRNPUL2Q1KMD3 747 aaKnown RBP36.02■■■■□ 3.36
MBD3-202ENST00000434436 ABCA5Q8WWZ7 1642 aa35.95■■■■□ 3.35
MBD3-202ENST00000434436 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
MBD3-202ENST00000434436 CTTNBP2Q8WZ74 1663 aa35.85■■■■□ 3.33
MBD3-202ENST00000434436 GAPVD1Q14C86 1478 aa35.85■■■■□ 3.33
MBD3-202ENST00000434436 TARBP1Q13395 1621 aaKnown RBP35.82■■■■□ 3.32
MBD3-202ENST00000434436 MAP3K1Q13233 1512 aa35.8■■■■□ 3.32
MBD3-202ENST00000434436 TIAM1Q13009 1591 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms