Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 AC092296.2-201ENST00000589470 999 ntBASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCAF1Q9Y4C2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 AC025884.2-201ENST00000553429 711 ntBASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 MIR4449-201ENST00000578365 66 ntBASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.35■■□□□ 1.49
TCAF1Q9Y4C2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 AC020928.2-201ENST00000588717 2197 ntBASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TCAF1Q9Y4C2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TCAF1Q9Y4C2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TCAF1Q9Y4C2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TCAF1Q9Y4C2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TCAF1Q9Y4C2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.32■■□□□ 1.48
TCAF1Q9Y4C2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 AC096887.2-201ENST00000623443 1957 ntBASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 AC022413.1-201ENST00000624602 984 ntBASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCAF1Q9Y4C2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCAF1Q9Y4C2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.3■■□□□ 1.48
TCAF1Q9Y4C2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCAF1Q9Y4C2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TCAF1Q9Y4C2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCAF1Q9Y4C2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCAF1Q9Y4C2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TCAF1Q9Y4C2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TCAF1Q9Y4C2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TCAF1Q9Y4C2 SMPD5-203ENST00000639008 1464 ntBASIC24.28■■□□□ 1.48
TCAF1Q9Y4C2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.28■■□□□ 1.48
TCAF1Q9Y4C2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.28■■□□□ 1.48
TCAF1Q9Y4C2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.28■■□□□ 1.48
TCAF1Q9Y4C2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.27■■□□□ 1.48
TCAF1Q9Y4C2 MIR3960-201ENST00000583311 91 ntBASIC24.27■■□□□ 1.48
TCAF1Q9Y4C2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TCAF1Q9Y4C2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TCAF1Q9Y4C2 ECEL1P2-201ENST00000461596 1295 ntBASIC24.26■■□□□ 1.47
TCAF1Q9Y4C2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.26■■□□□ 1.47
TCAF1Q9Y4C2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TCAF1Q9Y4C2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TCAF1Q9Y4C2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCAF1Q9Y4C2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.25■■□□□ 1.47
TCAF1Q9Y4C2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCAF1Q9Y4C2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.24■■□□□ 1.47
TCAF1Q9Y4C2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TCAF1Q9Y4C2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TCAF1Q9Y4C2 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.23■■□□□ 1.47
TCAF1Q9Y4C2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
TCAF1Q9Y4C2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TCAF1Q9Y4C2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TCAF1Q9Y4C2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TCAF1Q9Y4C2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.21■■□□□ 1.47
TCAF1Q9Y4C2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
TCAF1Q9Y4C2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
TCAF1Q9Y4C2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TCAF1Q9Y4C2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.2■■□□□ 1.46
TCAF1Q9Y4C2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.2■■□□□ 1.46
TCAF1Q9Y4C2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.2■■□□□ 1.46
TCAF1Q9Y4C2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 GPX1-201ENST00000419349 1106 ntBASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TCAF1Q9Y4C2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
TCAF1Q9Y4C2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TCAF1Q9Y4C2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms