Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.16■■□□□ 1.62
CD48P09326 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CD48P09326 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.16■■□□□ 1.62
CD48P09326 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD48P09326 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.15■■□□□ 1.62
CD48P09326 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CD48P09326 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CD48P09326 AC022413.1-201ENST00000624602 984 ntBASIC25.15■■□□□ 1.62
CD48P09326 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CD48P09326 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.15■■□□□ 1.62
CD48P09326 AC096887.2-201ENST00000623443 1957 ntBASIC25.14■■□□□ 1.62
CD48P09326 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD48P09326 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD48P09326 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.14■■□□□ 1.62
CD48P09326 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CD48P09326 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD48P09326 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.14■■□□□ 1.62
CD48P09326 AC025884.2-201ENST00000553429 711 ntBASIC25.14■■□□□ 1.62
CD48P09326 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD48P09326 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CD48P09326 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CD48P09326 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.14■■□□□ 1.61
CD48P09326 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CD48P09326 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CD48P09326 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CD48P09326 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.13■■□□□ 1.61
CD48P09326 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CD48P09326 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.13■■□□□ 1.61
CD48P09326 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.13■■□□□ 1.61
CD48P09326 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.13■■□□□ 1.61
CD48P09326 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CD48P09326 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD48P09326 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CD48P09326 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD48P09326 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CD48P09326 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD48P09326 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD48P09326 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.12■■□□□ 1.61
CD48P09326 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CD48P09326 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CD48P09326 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CD48P09326 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD48P09326 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
CD48P09326 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CD48P09326 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.09■■□□□ 1.61
CD48P09326 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CD48P09326 SMPD5-203ENST00000639008 1464 ntBASIC25.08■■□□□ 1.6
CD48P09326 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
CD48P09326 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.07■■□□□ 1.6
CD48P09326 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CD48P09326 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD48P09326 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD48P09326 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.06■■□□□ 1.6
CD48P09326 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CD48P09326 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD48P09326 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD48P09326 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.05■■□□□ 1.6
CD48P09326 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CD48P09326 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD48P09326 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.05■■□□□ 1.6
CD48P09326 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.05■■□□□ 1.6
CD48P09326 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD48P09326 GPX1-201ENST00000419349 1106 ntBASIC25.04■■□□□ 1.6
CD48P09326 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD48P09326 ECEL1P2-201ENST00000461596 1295 ntBASIC25.04■■□□□ 1.6
CD48P09326 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.04■■□□□ 1.6
CD48P09326 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD48P09326 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD48P09326 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.04■■□□□ 1.6
CD48P09326 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD48P09326 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD48P09326 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD48P09326 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD48P09326 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.02■■□□□ 1.6
CD48P09326 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD48P09326 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD48P09326 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CD48P09326 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD48P09326 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
CD48P09326 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CD48P09326 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
CD48P09326 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.01■■□□□ 1.59
CD48P09326 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CD48P09326 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
CD48P09326 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
CD48P09326 MIR3960-201ENST00000583311 91 ntBASIC25■■□□□ 1.59
CD48P09326 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CD48P09326 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CD48P09326 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD48P09326 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD48P09326 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD48P09326 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
CD48P09326 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD48P09326 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.99■■□□□ 1.59
CD48P09326 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.99■■□□□ 1.59
CD48P09326 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD48P09326 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.98■■□□□ 1.59
CD48P09326 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CD48P09326 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CD48P09326 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms