Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRBV6-6A0A0A6YYG2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-6A0A0A6YYG2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-6A0A0A6YYG2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-6A0A0A6YYG2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-6A0A0A6YYG2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-6A0A0A6YYG2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 AC093323.1-202ENST00000635031 2045 ntBASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 AC022211.4-201ENST00000625094 2161 ntBASIC20.1■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TRBV6-6A0A0A6YYG2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-6A0A0A6YYG2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TRBV6-6A0A0A6YYG2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV6-6A0A0A6YYG2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.08■□□□□ 0.81
TRBV6-6A0A0A6YYG2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.08■□□□□ 0.81
TRBV6-6A0A0A6YYG2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.08■□□□□ 0.81
TRBV6-6A0A0A6YYG2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV6-6A0A0A6YYG2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 MIR3648-2-201ENST00000581792 180 ntBASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 MIR3648-1-201ENST00000615959 180 ntBASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.07■□□□□ 0.8
TRBV6-6A0A0A6YYG2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ABHD17AP4-201ENST00000411545 909 ntBASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRBV6-6A0A0A6YYG2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-6A0A0A6YYG2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-6A0A0A6YYG2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 AC138932.3-201ENST00000567634 1902 ntBASIC20.04■□□□□ 0.8
TRBV6-6A0A0A6YYG2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-6A0A0A6YYG2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
TRBV6-6A0A0A6YYG2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-6A0A0A6YYG2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-6A0A0A6YYG2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-6A0A0A6YYG2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-6A0A0A6YYG2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-6A0A0A6YYG2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV6-6A0A0A6YYG2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TRBV6-6A0A0A6YYG2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.01■□□□□ 0.79
TRBV6-6A0A0A6YYG2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-6A0A0A6YYG2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV6-6A0A0A6YYG2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-6A0A0A6YYG2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 AC097639.1-201ENST00000565519 1891 ntBASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRBV6-6A0A0A6YYG2 AL139125.2-201ENST00000623134 1869 ntBASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-6A0A0A6YYG2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms