Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS13DQ5THJ4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS13DQ5THJ4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS13DQ5THJ4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS13DQ5THJ4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS13DQ5THJ4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS13DQ5THJ4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VPS13DQ5THJ4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS13DQ5THJ4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VPS13DQ5THJ4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS13DQ5THJ4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS13DQ5THJ4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13DQ5THJ4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.83■□□□□ 0.29
VPS13DQ5THJ4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VPS13DQ5THJ4 AL031848.2-201ENST00000607670 837 ntBASIC16.83■□□□□ 0.29
VPS13DQ5THJ4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS13DQ5THJ4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS13DQ5THJ4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 AC131212.1-201ENST00000613771 668 ntBASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 AC087393.1-201ENST00000582896 145 ntBASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 MIR935-201ENST00000401179 91 ntBASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 Z92544.1-202ENST00000571933 1220 ntBASIC16.82■□□□□ 0.28
VPS13DQ5THJ4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 AC239859.2-201ENST00000444165 318 ntBASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS13DQ5THJ4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 AL359504.2-201ENST00000605506 1601 ntBASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13DQ5THJ4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS13DQ5THJ4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13DQ5THJ4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS13DQ5THJ4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13DQ5THJ4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13DQ5THJ4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VPS13DQ5THJ4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VPS13DQ5THJ4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13DQ5THJ4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13DQ5THJ4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13DQ5THJ4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13DQ5THJ4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS13DQ5THJ4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms