RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 NISCHQ9Y2I1 1504 aa57.99■■■■■ 6.87
TMEM54-201ENST00000329151 CCDC180Q9P1Z9 1646 aa52.11■■■■■ 5.93
TMEM54-201ENST00000329151 ABCC9O60706 1549 aa52.02■■■■■ 5.92
TMEM54-201ENST00000329151 RB1CC1Q8TDY2 1594 aa49.6■■■■■ 5.53
TMEM54-201ENST00000329151 NACADO15069 1562 aa49.23■■■■■ 5.47
TMEM54-201ENST00000329151 DCAF8L2P0C7V8 631 aa49.14■■■■■ 5.46
TMEM54-201ENST00000329151 DNAJC5BQ9UF47 199 aa48.55■■■■■ 5.36
TMEM54-201ENST00000329151 MYO15BQ96JP2 1530 aa48.48■■■■■ 5.35
TMEM54-201ENST00000329151 UNC13AQ9UPW8 1703 aa48.42■■■■■ 5.34
TMEM54-201ENST00000329151 PABPN1Q86U42 306 aaKnown RBP eCLIP48.42■■■■■ 5.34
TMEM54-201ENST00000329151 ZCCHC6Q5VYS8 1495 aaKnown RBP48.05■■■■■ 5.28
TMEM54-201ENST00000329151 BICRAQ9NZM4 1560 aa47.97■■■■■ 5.27
TMEM54-201ENST00000329151 DCAF1Q9Y4B6 1507 aa47.89■■■■■ 5.26
TMEM54-201ENST00000329151 SCRIBQ14160 1630 aa47.49■■■■■ 5.19
TMEM54-201ENST00000329151 SHROOM4Q9ULL8 1493 aa47.46■■■■■ 5.19
TMEM54-201ENST00000329151 CC2D2AQ9P2K1 1620 aa46.99■■■■■ 5.11
TMEM54-201ENST00000329151 EIF4G1Q04637 1599 aaKnown RBP46.89■■■■■ 5.1
TMEM54-201ENST00000329151 CECR2Q9BXF3 1484 aa46.87■■■■■ 5.09
TMEM54-201ENST00000329151 NCAPD3P42695 1498 aa45.36■■■■■ 4.85
TMEM54-201ENST00000329151 SMARCA4P51532 1647 aa45.27■■■■■ 4.84
TMEM54-201ENST00000329151 ATAD2BQ9ULI0 1458 aa45.24■■■■■ 4.83
TMEM54-201ENST00000329151 SMARCA2P51531 1590 aa45.24■■■■■ 4.83
TMEM54-201ENST00000329151 BAZ1AQ9NRL2 1556 aaPredicted RBP45.09■■■■■ 4.81
TMEM54-201ENST00000329151 HMGXB3Q12766 1538 aa45.09■■■■■ 4.81
TMEM54-201ENST00000329151 ERCC6Q03468 1493 aa45.04■■■■■ 4.8
TMEM54-201ENST00000329151 BAZ1BQ9UIG0 1483 aaKnown RBP44.92■■■■■ 4.78
TMEM54-201ENST00000329151 CUX2O14529 1486 aa44.84■■■■■ 4.77
TMEM54-201ENST00000329151 PEG3Q9GZU2 1588 aa44.76■■■■■ 4.76
TMEM54-201ENST00000329151 DNAJC5Q9H3Z4 198 aa44.67■■■■■ 4.74
TMEM54-201ENST00000329151 MROH2BQ7Z745 1585 aa44.65■■■■■ 4.74
TMEM54-201ENST00000329151 NESP48681 1621 aa44.64■■■■■ 4.74
TMEM54-201ENST00000329151 LAMC3Q9Y6N6 1575 aa44.43■■■■■ 4.7
TMEM54-201ENST00000329151 PDS5BQ9NTI5 1447 aa44.21■■■■■ 4.67
TMEM54-201ENST00000329151 THOC2Q8NI27 1593 aaKnown RBP44.19■■■■■ 4.66
TMEM54-201ENST00000329151 WIZO95785 1651 aa44.19■■■■■ 4.66
TMEM54-201ENST00000329151 KIF21AQ7Z4S6 1674 aa44.16■■■■■ 4.66
TMEM54-201ENST00000329151 CADPSQ9ULU8 1353 aa44.04■■■■■ 4.64
TMEM54-201ENST00000329151 MRC2Q9UBG0 1479 aa43.78■■■■■ 4.6
TMEM54-201ENST00000329151 RSF1Q96T23 1441 aaPredicted RBP43.74■■■■■ 4.59
TMEM54-201ENST00000329151 CEP164Q9UPV0 1460 aa43.66■■■■■ 4.58
TMEM54-201ENST00000329151 TOP2AP11388 1531 aaKnown RBP43.64■■■■■ 4.58
TMEM54-201ENST00000329151 WDR62O43379 1518 aa43.63■■■■■ 4.57
TMEM54-201ENST00000329151 FANCD2Q9BXW9 1451 aa43.57■■■■■ 4.56
TMEM54-201ENST00000329151 CFTRP13569 1480 aa43.51■■■■■ 4.56
TMEM54-201ENST00000329151 PRDM2Q13029 1718 aa43.24■■■■■ 4.51
TMEM54-201ENST00000329151 URB2Q14146 1524 aaKnown RBP43.13■■■■■ 4.5
TMEM54-201ENST00000329151 CCDC88BA6NC98 1476 aa43.1■■■■■ 4.49
TMEM54-201ENST00000329151 TRIM41Q8WV44 630 aa42.9■■■■■ 4.46
TMEM54-201ENST00000329151 OSCARQ8IYS5 282 aa42.84■■■■■ 4.45
TMEM54-201ENST00000329151 IFT140Q96RY7 1462 aa42.75■■■■■ 4.43
TMEM54-201ENST00000329151 ABCC8Q09428 1581 aa42.73■■■■■ 4.43
TMEM54-201ENST00000329151 TOPBP1Q92547 1522 aa42.72■■■■■ 4.43
TMEM54-201ENST00000329151 DNMBPQ6XZF7 1577 aa42.62■■■■■ 4.41
TMEM54-201ENST00000329151 ZNF608Q9ULD9 1512 aaPredicted RBP42.59■■■■■ 4.41
TMEM54-201ENST00000329151 EIF4G3O43432 1585 aaKnown RBP42.44■■■■■ 4.39
TMEM54-201ENST00000329151 TARBP1Q13395 1621 aaKnown RBP42.31■■■■■ 4.36
TMEM54-201ENST00000329151 POLA1P09884 1462 aaPredicted RBP42.28■■■■■ 4.36
TMEM54-201ENST00000329151 AQRO60306 1485 aaKnown RBP eCLIP42.25■■■■■ 4.355e-7■■■■■ 29.5
TMEM54-201ENST00000329151 RIMBP3CA6NJZ7 1639 aa42.23■■■■■ 4.35
TMEM54-201ENST00000329151 RIMBP3BA6NNM3 1639 aa42.23■■■■■ 4.35
TMEM54-201ENST00000329151 RIMBP3Q9UFD9 1639 aa42.23■■■■■ 4.35
TMEM54-201ENST00000329151 CHD1O14646 1710 aa42.16■■■■■ 4.34
TMEM54-201ENST00000329151 SOGA1O94964 1423 aa42.14■■■■■ 4.34
TMEM54-201ENST00000329151 FBLN2P98095 1184 aa42.14■■■■■ 4.34
TMEM54-201ENST00000329151 RAD54L2Q9Y4B4 1467 aa42.11■■■■■ 4.33
TMEM54-201ENST00000329151 ARHGEF11O15085 1522 aa42.09■■■■■ 4.33
TMEM54-201ENST00000329151 FGD5Q6ZNL6 1462 aa42.05■■■■■ 4.32
TMEM54-201ENST00000329151 SUPT5HO00267 1087 aaKnown RBP42.03■■■■■ 4.32
TMEM54-201ENST00000329151 TDRD9Q8NDG6 1382 aaKnown RBP42.01■■■■■ 4.32
TMEM54-201ENST00000329151 WDR97A6NE52 1622 aa41.98■■■■■ 4.31
TMEM54-201ENST00000329151 CUX1P39880 1505 aa41.97■■■■■ 4.31
TMEM54-201ENST00000329151 SNAPC4Q5SXM2 1469 aa41.86■■■■■ 4.29
TMEM54-201ENST00000329151 CYB5RLQ6IPT4 315 aa41.83■■■■■ 4.29
TMEM54-201ENST00000329151 CHMP7Q8WUX9 453 aaPredicted RBP41.8■■■■■ 4.28
TMEM54-201ENST00000329151 GRIN2BQ13224 1484 aa41.78■■■■■ 4.28
TMEM54-201ENST00000329151 MAGI1Q96QZ7 1491 aaPredicted RBP41.78■■■■■ 4.28
TMEM54-201ENST00000329151 SYNJ1O43426 1573 aa41.7■■■■■ 4.27
TMEM54-201ENST00000329151 PBRM1Q86U86 1689 aa41.66■■■■■ 4.26
TMEM54-201ENST00000329151 GAPVD1Q14C86 1478 aa41.64■■■■■ 4.26
TMEM54-201ENST00000329151 ARAP1Q96P48 1450 aa41.63■■■■■ 4.25
TMEM54-201ENST00000329151 SYNJ2O15056 1496 aa41.62■■■■■ 4.25
TMEM54-201ENST00000329151 CLASP1Q7Z460 1538 aa41.56■■■■■ 4.24
TMEM54-201ENST00000329151 ABCA10Q8WWZ4 1543 aa41.55■■■■■ 4.24
TMEM54-201ENST00000329151 ABCA5Q8WWZ7 1642 aa41.49■■■■■ 4.23
TMEM54-201ENST00000329151 WRNQ14191 1432 aaPredicted RBP eCLIP41.47■■■■■ 4.23
TMEM54-201ENST00000329151 TRHP20396 242 aaPredicted RBP41.47■■■■■ 4.23
TMEM54-201ENST00000329151 TOP2BQ02880 1626 aa41.37■■■■■ 4.21
TMEM54-201ENST00000329151 BIVM-ERCC5R4GMW8 1640 aa41.37■■■■■ 4.21
TMEM54-201ENST00000329151 GRIN2AQ12879 1464 aa41.21■■■■■ 4.19
TMEM54-201ENST00000329151 ADAMTS12P58397 1594 aa41.2■■■■■ 4.19
TMEM54-201ENST00000329151 FHAD1B1AJZ9 1412 aa41.1■■■■■ 4.17
TMEM54-201ENST00000329151 ERICH3Q5RHP9 1530 aa41.08■■■■■ 4.17
TMEM54-201ENST00000329151 CEP170Q5SW79 1584 aa41.03■■■■■ 4.16
TMEM54-201ENST00000329151 NUP160Q12769 1436 aa41.01■■■■■ 4.16
TMEM54-201ENST00000329151 ERCC6L2Q5T890 1561 aa40.89■■■■■ 4.14
TMEM54-201ENST00000329151 SHROOM2Q13796 1616 aa40.85■■■■■ 4.13
TMEM54-201ENST00000329151 PRG4Q92954 1404 aaPredicted RBP40.69■■■■■ 4.1
TMEM54-201ENST00000329151 JPH4Q96JJ6 628 aa40.67■■■■■ 4.1
TMEM54-201ENST00000329151 KIF27Q86VH2 1401 aa40.63■■■■■ 4.09
TMEM54-201ENST00000329151 RUSC2Q8N2Y8 1516 aa40.62■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms