Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.19■□□□□ 0.023e-18■□□□□ 9.7
SRSF1Q07955 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.012e-6■□□□□ 9.7
SRSF1Q07955 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.012e-6■□□□□ 9.7
SRSF1Q07955 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-8■□□□□ 9.7
SRSF1Q07955 PIH1D1-206ENST00000595516 841 ntTSL 314.79□□□□□ -0.042e-6■□□□□ 9.7
SRSF1Q07955 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.043e-18■□□□□ 9.7
SRSF1Q07955 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.77□□□□□ -0.043e-18■□□□□ 9.7
SRSF1Q07955 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.76□□□□□ -0.053e-18■□□□□ 9.7
SRSF1Q07955 ENGASE-209ENST00000584568 448 ntTSL 514.72□□□□□ -0.052e-6■□□□□ 9.7
SRSF1Q07955 PIH1D1-217ENST00000599366 833 ntTSL 314.68□□□□□ -0.062e-6■□□□□ 9.7
SRSF1Q07955 CORO7-223ENST00000574311 1737 ntTSL 514.56□□□□□ -0.082e-6■□□□□ 9.7
SRSF1Q07955 ACADVL-219ENST00000579425 1234 ntTSL 514.52□□□□□ -0.095e-8■□□□□ 9.7
SRSF1Q07955 ACADVL-239ENST00000585203 947 ntTSL 514.52□□□□□ -0.095e-8■□□□□ 9.7
SRSF1Q07955 CORO7-209ENST00000571756 1890 ntTSL 214.31□□□□□ -0.122e-6■□□□□ 9.7
SRSF1Q07955 PIH1D1-203ENST00000593900 932 ntTSL 214.14□□□□□ -0.152e-6■□□□□ 9.7
SRSF1Q07955 CORO7-206ENST00000571052 578 ntTSL 414.07□□□□□ -0.162e-6■□□□□ 9.7
SRSF1Q07955 SUGP1-215ENST00000606725 728 ntTSL 314.06□□□□□ -0.162e-6■□□□□ 9.7
SRSF1Q07955 ACADVL-214ENST00000578711 1732 nt13.84□□□□□ -0.195e-8■□□□□ 9.7
SRSF1Q07955 PIH1D1-205ENST00000595074 1037 ntTSL 213.72□□□□□ -0.212e-6■□□□□ 9.7
SRSF1Q07955 CORO7-PAM16-203ENST00000575334 3815 ntTSL 213.66□□□□□ -0.222e-6■□□□□ 9.7
SRSF1Q07955 POLR1C-207ENST00000481352 1725 ntTSL 513.66□□□□□ -0.222e-8■□□□□ 9.7
SRSF1Q07955 PIH1D1-207ENST00000595550 583 ntTSL 213.62□□□□□ -0.232e-6■□□□□ 9.7
SRSF1Q07955 MAN2C1-233ENST00000566569 848 ntTSL 513.28□□□□□ -0.282e-6■□□□□ 9.7
SRSF1Q07955 SUGP1-209ENST00000588731 2282 ntTSL 1 (best)13.28□□□□□ -0.282e-6■□□□□ 9.7
SRSF1Q07955 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.322e-6■□□□□ 9.7
SRSF1Q07955 LRCH4-202ENST00000467201 4754 ntTSL 212.98□□□□□ -0.332e-6■□□□□ 9.7
SRSF1Q07955 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.96□□□□□ -0.343e-18■□□□□ 9.7
SRSF1Q07955 POLR1C-209ENST00000512472 569 ntTSL 212.89□□□□□ -0.352e-8■□□□□ 9.7
SRSF1Q07955 MAN2C1-205ENST00000562067 710 ntTSL 512.84□□□□□ -0.352e-6■□□□□ 9.7
SRSF1Q07955 MAN2C1-221ENST00000564929 851 ntTSL 512.84□□□□□ -0.352e-6■□□□□ 9.7
SRSF1Q07955 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.83□□□□□ -0.363e-18■□□□□ 9.7
SRSF1Q07955 SUGP1-206ENST00000587119 2177 ntTSL 212.2□□□□□ -0.462e-6■□□□□ 9.7
SRSF1Q07955 POLR1C-204ENST00000423780 418 ntTSL 512.17□□□□□ -0.462e-8■□□□□ 9.7
SRSF1Q07955 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.472e-8■□□□□ 9.7
SRSF1Q07955 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.513e-18■□□□□ 9.7
SRSF1Q07955 SEPT8-213ENST00000481030 790 ntTSL 311.72□□□□□ -0.533e-18■□□□□ 9.7
SRSF1Q07955 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC11.62□□□□□ -0.552e-8■□□□□ 9.7
SRSF1Q07955 POLR1C-206ENST00000455605 1882 ntTSL 511.25□□□□□ -0.612e-8■□□□□ 9.7
SRSF1Q07955 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.07□□□□□ -0.642e-6■□□□□ 9.7
SRSF1Q07955 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.642e-6■□□□□ 9.7
SRSF1Q07955 DVL1-205ENST00000631679 778 ntTSL 510.93□□□□□ -0.662e-6■□□□□ 9.7
SRSF1Q07955 CCDC84-210ENST00000583842 551 ntTSL 310.46□□□□□ -0.733e-8■□□□□ 9.7
SRSF1Q07955 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.742e-6■□□□□ 9.7
SRSF1Q07955 CORO7-227ENST00000575714 2978 ntTSL 510.25□□□□□ -0.772e-6■□□□□ 9.7
SRSF1Q07955 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.842e-6■□□□□ 9.7
SRSF1Q07955 CORO7-208ENST00000571227 3578 ntTSL 59.61□□□□□ -0.872e-6■□□□□ 9.7
SRSF1Q07955 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC9.56□□□□□ -0.882e-6■□□□□ 9.7
SRSF1Q07955 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC9.45□□□□□ -0.93e-18■□□□□ 9.7
SRSF1Q07955 LRCH4-207ENST00000487697 756 ntTSL 39.31□□□□□ -0.922e-6■□□□□ 9.7
SRSF1Q07955 AFDN-220ENST00000511503 1257 ntTSL 29.1□□□□□ -0.952e-6■□□□□ 9.7
SRSF1Q07955 AFDN-222ENST00000515794 746 ntTSL 39.1□□□□□ -0.952e-6■□□□□ 9.7
SRSF1Q07955 SUGP1-213ENST00000591350 601 ntTSL 49.03□□□□□ -0.962e-6■□□□□ 9.7
SRSF1Q07955 POLR1C-208ENST00000488601 973 ntTSL 28.48□□□□□ -1.052e-8■□□□□ 9.7
SRSF1Q07955 POLE-214ENST00000539618 299 ntTSL 38.22□□□□□ -1.092e-6■□□□□ 9.7
SRSF1Q07955 AFDN-213ENST00000485634 606 ntTSL 27.97□□□□□ -1.132e-6■□□□□ 9.7
SRSF1Q07955 AFDN-214ENST00000486649 423 ntTSL 27.41□□□□□ -1.222e-6■□□□□ 9.7
SRSF1Q07955 ANKRD17-208ENST00000559367 539 ntTSL 57.24□□□□□ -1.252e-6■□□□□ 9.7
SRSF1Q07955 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.452e-6■□□□□ 9.7
SRSF1Q07955 TARDBP-209ENST00000480464 790 ntTSL 24.78□□□□□ -1.642e-6■□□□□ 9.7
SRSF1Q07955 ACADVL-213ENST00000578579 458 ntTSL 34.69□□□□□ -1.665e-8■□□□□ 9.7
SRSF1Q07955 AL109811.4-205ENST00000620028 763 ntTSL 54.58□□□□□ -1.682e-6■□□□□ 9.7
SRSF1Q07955 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.72e-6■□□□□ 9.7
SRSF1Q07955 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.18□□□□□ -1.742e-6■□□□□ 9.7
SRSF1Q07955 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.35□□□□□ -1.872e-6■□□□□ 9.7
SRSF1Q07955 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.23□□□□□ -1.892e-6■□□□□ 9.7
SRSF1Q07955 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.01□□□□□ -1.932e-6■□□□□ 9.7
SRSF1Q07955 POLR1C-205ENST00000428025 576 ntTSL 42.64□□□□□ -1.992e-8■□□□□ 9.7
SRSF1Q07955 SLC38A2-210ENST00000551405 526 ntTSL 417.33■□□□□ 0.361e-16■□□□□ 9.6
SRSF1Q07955 SLC38A2-203ENST00000547252 847 ntTSL 37.7□□□□□ -1.181e-16■□□□□ 9.6
SRSF1Q07955 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.211e-16■□□□□ 9.6
SRSF1Q07955 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.65□□□□□ -1.831e-16■□□□□ 9.6
SRSF1Q07955 SLC38A2-208ENST00000549258 4384 ntTSL 23.63□□□□□ -1.831e-16■□□□□ 9.6
SRSF1Q07955 NECAB3-206ENST00000477778 462 ntTSL 312.3□□□□□ -0.441e-10■□□□□ 9.6
SRSF1Q07955 UTP4-211ENST00000567460 595 ntTSL 422.52■■□□□ 1.21e-7■□□□□ 9.6
SRSF1Q07955 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.893e-9■□□□□ 9.6
SRSF1Q07955 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.723e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-202ENST00000537450 1318 ntTSL 217.24■□□□□ 0.355e-9■□□□□ 9.6
SRSF1Q07955 AKT1-209ENST00000554585 858 ntTSL 316.72■□□□□ 0.271e-7■□□□□ 9.6
SRSF1Q07955 UTP4-213ENST00000568448 562 ntTSL 416.14■□□□□ 0.171e-7■□□□□ 9.6
SRSF1Q07955 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.043e-9■□□□□ 9.6
SRSF1Q07955 AKT1-205ENST00000553506 2830 ntTSL 215.15■□□□□ 0.021e-7■□□□□ 9.6
SRSF1Q07955 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -01e-7■□□□□ 9.6
SRSF1Q07955 UTP4-203ENST00000562237 2186 ntTSL 1 (best)15.01□□□□□ -0.011e-7■□□□□ 9.6
SRSF1Q07955 AKT1-213ENST00000555458 705 ntTSL 214.06□□□□□ -0.161e-7■□□□□ 9.6
SRSF1Q07955 UTP4-209ENST00000567235 586 ntTSL 513.69□□□□□ -0.221e-7■□□□□ 9.6
SRSF1Q07955 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.245e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-208ENST00000563428 2531 ntTSL 213.05□□□□□ -0.325e-9■□□□□ 9.6
SRSF1Q07955 AKT1-207ENST00000554192 922 ntTSL 212.85□□□□□ -0.351e-7■□□□□ 9.6
SRSF1Q07955 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.383e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-204ENST00000544090 2747 ntTSL 212.11□□□□□ -0.475e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-217ENST00000566903 2628 ntTSL 511.78□□□□□ -0.525e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.555e-9■□□□□ 9.6
SRSF1Q07955 UTP4-208ENST00000567015 690 ntTSL 211.09□□□□□ -0.631e-7■□□□□ 9.6
SRSF1Q07955 TAF1C-212ENST00000564774 4637 ntTSL 210.95□□□□□ -0.665e-9■□□□□ 9.6
SRSF1Q07955 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC10.93□□□□□ -0.661e-7■□□□□ 9.6
SRSF1Q07955 UTP4-207ENST00000566227 747 ntTSL 310.9□□□□□ -0.661e-7■□□□□ 9.6
SRSF1Q07955 UTP4-216ENST00000569800 552 ntTSL 410.28□□□□□ -0.761e-7■□□□□ 9.6
SRSF1Q07955 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.845e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.935e-9■□□□□ 9.6
SRSF1Q07955 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.955e-9■□□□□ 9.6
Retrieved 100 of 14,836 protein–RNA pairs in 616.1 ms