RNA–Protein interactions for RNA: ENST00000606725.5

SUGP1-215, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 3

Gene SUGP1, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-215ENST00000606725 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SUGP1-215ENST00000606725 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
SUGP1-215ENST00000606725 ABCC9O60706 1549 aa32.32■■■□□ 2.76
SUGP1-215ENST00000606725 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
SUGP1-215ENST00000606725 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
SUGP1-215ENST00000606725 NACADO15069 1562 aa31.41■■■□□ 2.62
SUGP1-215ENST00000606725 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
SUGP1-215ENST00000606725 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
SUGP1-215ENST00000606725 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
SUGP1-215ENST00000606725 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
SUGP1-215ENST00000606725 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
SUGP1-215ENST00000606725 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
SUGP1-215ENST00000606725 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.42
SUGP1-215ENST00000606725 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
SUGP1-215ENST00000606725 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
SUGP1-215ENST00000606725 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
SUGP1-215ENST00000606725 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
SUGP1-215ENST00000606725 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
SUGP1-215ENST00000606725 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
SUGP1-215ENST00000606725 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
SUGP1-215ENST00000606725 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
SUGP1-215ENST00000606725 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
SUGP1-215ENST00000606725 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
SUGP1-215ENST00000606725 SMARCA2P51531 1590 aa29.03■■■□□ 2.24
SUGP1-215ENST00000606725 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
SUGP1-215ENST00000606725 WIZO95785 1651 aa28.96■■■□□ 2.23
SUGP1-215ENST00000606725 NCAPD3P42695 1498 aa28.95■■■□□ 2.22
SUGP1-215ENST00000606725 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
SUGP1-215ENST00000606725 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
SUGP1-215ENST00000606725 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
SUGP1-215ENST00000606725 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
SUGP1-215ENST00000606725 CCDC88BA6NC98 1476 aa28.28■■■□□ 2.12
SUGP1-215ENST00000606725 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
SUGP1-215ENST00000606725 NESP48681 1621 aa28.14■■■□□ 2.09
SUGP1-215ENST00000606725 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
SUGP1-215ENST00000606725 CFTRP13569 1480 aa28.07■■■□□ 2.08
SUGP1-215ENST00000606725 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
SUGP1-215ENST00000606725 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
SUGP1-215ENST00000606725 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
SUGP1-215ENST00000606725 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
SUGP1-215ENST00000606725 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
SUGP1-215ENST00000606725 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
SUGP1-215ENST00000606725 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
SUGP1-215ENST00000606725 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
SUGP1-215ENST00000606725 WDR62O43379 1518 aa27.56■■■□□ 2
SUGP1-215ENST00000606725 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
SUGP1-215ENST00000606725 DNMBPQ6XZF7 1577 aa27.46■■□□□ 1.99
SUGP1-215ENST00000606725 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
SUGP1-215ENST00000606725 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
SUGP1-215ENST00000606725 CUX1P39880 1505 aa27.41■■□□□ 1.98
SUGP1-215ENST00000606725 CUX2O14529 1486 aa27.4■■□□□ 1.98
SUGP1-215ENST00000606725 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
SUGP1-215ENST00000606725 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
SUGP1-215ENST00000606725 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
SUGP1-215ENST00000606725 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SUGP1-215ENST00000606725 POLA1P09884 1462 aaPredicted RBP27.24■■□□□ 1.95
SUGP1-215ENST00000606725 FGD5Q6ZNL6 1462 aa27.22■■□□□ 1.95
SUGP1-215ENST00000606725 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
SUGP1-215ENST00000606725 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
SUGP1-215ENST00000606725 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
SUGP1-215ENST00000606725 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
SUGP1-215ENST00000606725 SOGA1O94964 1423 aa27.03■■□□□ 1.92
SUGP1-215ENST00000606725 ABCA10Q8WWZ4 1543 aa26.99■■□□□ 1.91
SUGP1-215ENST00000606725 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
SUGP1-215ENST00000606725 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
SUGP1-215ENST00000606725 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
SUGP1-215ENST00000606725 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
SUGP1-215ENST00000606725 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.892e-6■■■■□ 22.5
SUGP1-215ENST00000606725 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
SUGP1-215ENST00000606725 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
SUGP1-215ENST00000606725 PBRM1Q86U86 1689 aa26.81■■□□□ 1.88
SUGP1-215ENST00000606725 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
SUGP1-215ENST00000606725 GRIN2BQ13224 1484 aa26.72■■□□□ 1.87
SUGP1-215ENST00000606725 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
SUGP1-215ENST00000606725 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
SUGP1-215ENST00000606725 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
SUGP1-215ENST00000606725 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
SUGP1-215ENST00000606725 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SUGP1-215ENST00000606725 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
SUGP1-215ENST00000606725 CHD1O14646 1710 aa26.56■■□□□ 1.84
SUGP1-215ENST00000606725 CUL7Q14999 1698 aa26.54■■□□□ 1.84
SUGP1-215ENST00000606725 IGF1RP08069 1367 aa26.54■■□□□ 1.84
SUGP1-215ENST00000606725 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
SUGP1-215ENST00000606725 EEA1Q15075 1411 aa26.48■■□□□ 1.83
SUGP1-215ENST00000606725 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
SUGP1-215ENST00000606725 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
SUGP1-215ENST00000606725 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
SUGP1-215ENST00000606725 CARMIL1Q5VZK9 1371 aa26.36■■□□□ 1.81
SUGP1-215ENST00000606725 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
SUGP1-215ENST00000606725 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
SUGP1-215ENST00000606725 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
SUGP1-215ENST00000606725 NUP160Q12769 1436 aa26.29■■□□□ 1.8
SUGP1-215ENST00000606725 RAPGEF2Q9Y4G8 1499 aa26.29■■□□□ 1.8
SUGP1-215ENST00000606725 FBLN2P98095 1184 aa26.28■■□□□ 1.8
SUGP1-215ENST00000606725 KIF21BO75037 1637 aa26.28■■□□□ 1.8
SUGP1-215ENST00000606725 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
SUGP1-215ENST00000606725 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
SUGP1-215ENST00000606725 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
SUGP1-215ENST00000606725 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
SUGP1-215ENST00000606725 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms