RNA–Protein interactions for RNA: ENST00000588731.6

SUGP1-209, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-209ENST00000588731 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
SUGP1-209ENST00000588731 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.63
SUGP1-209ENST00000588731 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
SUGP1-209ENST00000588731 ABCC9O60706 1549 aa30.13■■■□□ 2.41
SUGP1-209ENST00000588731 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
SUGP1-209ENST00000588731 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
SUGP1-209ENST00000588731 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
SUGP1-209ENST00000588731 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
SUGP1-209ENST00000588731 NACADO15069 1562 aa29.4■■■□□ 2.3
SUGP1-209ENST00000588731 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
SUGP1-209ENST00000588731 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
SUGP1-209ENST00000588731 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
SUGP1-209ENST00000588731 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.152e-6■■□□□ 13.9
SUGP1-209ENST00000588731 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
SUGP1-209ENST00000588731 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
SUGP1-209ENST00000588731 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
SUGP1-209ENST00000588731 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
SUGP1-209ENST00000588731 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
SUGP1-209ENST00000588731 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
SUGP1-209ENST00000588731 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
SUGP1-209ENST00000588731 WIZO95785 1651 aa27.72■■■□□ 2.03
SUGP1-209ENST00000588731 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
SUGP1-209ENST00000588731 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
SUGP1-209ENST00000588731 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
SUGP1-209ENST00000588731 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
SUGP1-209ENST00000588731 SMARCA2P51531 1590 aa27.33■■□□□ 1.96
SUGP1-209ENST00000588731 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
SUGP1-209ENST00000588731 NCAPD3P42695 1498 aa27.21■■□□□ 1.95
SUGP1-209ENST00000588731 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.94
SUGP1-209ENST00000588731 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
SUGP1-209ENST00000588731 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
SUGP1-209ENST00000588731 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
SUGP1-209ENST00000588731 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
SUGP1-209ENST00000588731 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
SUGP1-209ENST00000588731 CFTRP13569 1480 aa26.57■■□□□ 1.84
SUGP1-209ENST00000588731 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
SUGP1-209ENST00000588731 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
SUGP1-209ENST00000588731 NESP48681 1621 aa26.43■■□□□ 1.82
SUGP1-209ENST00000588731 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
SUGP1-209ENST00000588731 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
SUGP1-209ENST00000588731 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
SUGP1-209ENST00000588731 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
SUGP1-209ENST00000588731 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SUGP1-209ENST00000588731 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
SUGP1-209ENST00000588731 CUX1P39880 1505 aa26.16■■□□□ 1.78
SUGP1-209ENST00000588731 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
SUGP1-209ENST00000588731 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
SUGP1-209ENST00000588731 LOC105371045A0A1W2PR82 267 aa26.07■■□□□ 1.76
SUGP1-209ENST00000588731 SOGA1O94964 1423 aa26.07■■□□□ 1.76
SUGP1-209ENST00000588731 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
SUGP1-209ENST00000588731 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
SUGP1-209ENST00000588731 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
SUGP1-209ENST00000588731 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
SUGP1-209ENST00000588731 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
SUGP1-209ENST00000588731 TOPBP1Q92547 1522 aa25.92■■□□□ 1.74
SUGP1-209ENST00000588731 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
SUGP1-209ENST00000588731 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
SUGP1-209ENST00000588731 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
SUGP1-209ENST00000588731 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.72
SUGP1-209ENST00000588731 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
SUGP1-209ENST00000588731 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
SUGP1-209ENST00000588731 EEA1Q15075 1411 aa25.78■■□□□ 1.72
SUGP1-209ENST00000588731 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
SUGP1-209ENST00000588731 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
SUGP1-209ENST00000588731 CUX2O14529 1486 aa25.7■■□□□ 1.7
SUGP1-209ENST00000588731 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
SUGP1-209ENST00000588731 WDR62O43379 1518 aa25.62■■□□□ 1.69
SUGP1-209ENST00000588731 ABCA10Q8WWZ4 1543 aa25.62■■□□□ 1.69
SUGP1-209ENST00000588731 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
SUGP1-209ENST00000588731 IGF1RP08069 1367 aa25.57■■□□□ 1.68
SUGP1-209ENST00000588731 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
SUGP1-209ENST00000588731 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
SUGP1-209ENST00000588731 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
SUGP1-209ENST00000588731 UBTFP17480 764 aaKnown RBP25.51■■□□□ 1.67
SUGP1-209ENST00000588731 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
SUGP1-209ENST00000588731 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
SUGP1-209ENST00000588731 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
SUGP1-209ENST00000588731 KIF21BO75037 1637 aa25.47■■□□□ 1.67
SUGP1-209ENST00000588731 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.663e-6■■■■□ 23.7
SUGP1-209ENST00000588731 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
SUGP1-209ENST00000588731 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
SUGP1-209ENST00000588731 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
SUGP1-209ENST00000588731 CARMIL1Q5VZK9 1371 aa25.4■■□□□ 1.66
SUGP1-209ENST00000588731 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
SUGP1-209ENST00000588731 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
SUGP1-209ENST00000588731 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
SUGP1-209ENST00000588731 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
SUGP1-209ENST00000588731 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
SUGP1-209ENST00000588731 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
SUGP1-209ENST00000588731 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
SUGP1-209ENST00000588731 CUL7Q14999 1698 aa25.2■■□□□ 1.62
SUGP1-209ENST00000588731 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
SUGP1-209ENST00000588731 CLIP1P30622 1438 aa25.12■■□□□ 1.61
SUGP1-209ENST00000588731 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
SUGP1-209ENST00000588731 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
SUGP1-209ENST00000588731 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
SUGP1-209ENST00000588731 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
SUGP1-209ENST00000588731 FBLN2P98095 1184 aa24.98■■□□□ 1.59
SUGP1-209ENST00000588731 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
SUGP1-209ENST00000588731 ARHGAP35Q9NRY4 1499 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms