RNA–Protein interactions for RNA: ENST00000567235.6

UTP4-209, Transcript of UTP4, small subunit processome component, humanhuman

TSL 5

Gene UTP4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-209ENST00000567235 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
UTP4-209ENST00000567235 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
UTP4-209ENST00000567235 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
UTP4-209ENST00000567235 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
UTP4-209ENST00000567235 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
UTP4-209ENST00000567235 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
UTP4-209ENST00000567235 ABCC9O60706 1549 aa31.19■■■□□ 2.58
UTP4-209ENST00000567235 NACADO15069 1562 aa30.96■■■□□ 2.55
UTP4-209ENST00000567235 SHROOM4Q9ULL8 1493 aa30.94■■■□□ 2.54
UTP4-209ENST00000567235 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
UTP4-209ENST00000567235 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
UTP4-209ENST00000567235 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
UTP4-209ENST00000567235 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
UTP4-209ENST00000567235 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
UTP4-209ENST00000567235 RSF1Q96T23 1441 aaPredicted RBP29.58■■■□□ 2.33
UTP4-209ENST00000567235 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
UTP4-209ENST00000567235 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
UTP4-209ENST00000567235 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
UTP4-209ENST00000567235 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
UTP4-209ENST00000567235 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
UTP4-209ENST00000567235 WIZO95785 1651 aa29.17■■■□□ 2.26
UTP4-209ENST00000567235 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.23
UTP4-209ENST00000567235 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.23
UTP4-209ENST00000567235 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
UTP4-209ENST00000567235 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
UTP4-209ENST00000567235 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
UTP4-209ENST00000567235 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
UTP4-209ENST00000567235 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
UTP4-209ENST00000567235 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
UTP4-209ENST00000567235 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
UTP4-209ENST00000567235 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
UTP4-209ENST00000567235 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
UTP4-209ENST00000567235 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
UTP4-209ENST00000567235 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
UTP4-209ENST00000567235 CFTRP13569 1480 aa27.91■■■□□ 2.06
UTP4-209ENST00000567235 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
UTP4-209ENST00000567235 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
UTP4-209ENST00000567235 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
UTP4-209ENST00000567235 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
UTP4-209ENST00000567235 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
UTP4-209ENST00000567235 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
UTP4-209ENST00000567235 EEA1Q15075 1411 aa27.61■■■□□ 2.01
UTP4-209ENST00000567235 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
UTP4-209ENST00000567235 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
UTP4-209ENST00000567235 CUX1P39880 1505 aa27.51■■□□□ 1.99
UTP4-209ENST00000567235 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
UTP4-209ENST00000567235 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
UTP4-209ENST00000567235 SOGA1O94964 1423 aa27.45■■□□□ 1.98
UTP4-209ENST00000567235 NESP48681 1621 aa27.41■■□□□ 1.98
UTP4-209ENST00000567235 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
UTP4-209ENST00000567235 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
UTP4-209ENST00000567235 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
UTP4-209ENST00000567235 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
UTP4-209ENST00000567235 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
UTP4-209ENST00000567235 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
UTP4-209ENST00000567235 KIF21BO75037 1637 aa27.22■■□□□ 1.95
UTP4-209ENST00000567235 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
UTP4-209ENST00000567235 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
UTP4-209ENST00000567235 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
UTP4-209ENST00000567235 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
UTP4-209ENST00000567235 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
UTP4-209ENST00000567235 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
UTP4-209ENST00000567235 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
UTP4-209ENST00000567235 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
UTP4-209ENST00000567235 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
UTP4-209ENST00000567235 CUX2O14529 1486 aa27.01■■□□□ 1.91
UTP4-209ENST00000567235 PRXQ9BXM0 1461 aa27.01■■□□□ 1.91
UTP4-209ENST00000567235 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
UTP4-209ENST00000567235 EHMT2Q96KQ7 1210 aa26.99■■□□□ 1.91
UTP4-209ENST00000567235 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
UTP4-209ENST00000567235 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
UTP4-209ENST00000567235 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
UTP4-209ENST00000567235 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
UTP4-209ENST00000567235 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
UTP4-209ENST00000567235 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
UTP4-209ENST00000567235 IGF1RP08069 1367 aa26.86■■□□□ 1.89
UTP4-209ENST00000567235 WDR62O43379 1518 aa26.84■■□□□ 1.89
UTP4-209ENST00000567235 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
UTP4-209ENST00000567235 ABCA5Q8WWZ7 1642 aa26.79■■□□□ 1.88
UTP4-209ENST00000567235 CUL7Q14999 1698 aa26.76■■□□□ 1.87
UTP4-209ENST00000567235 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
UTP4-209ENST00000567235 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
UTP4-209ENST00000567235 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
UTP4-209ENST00000567235 CLIP1P30622 1438 aa26.68■■□□□ 1.86
UTP4-209ENST00000567235 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
UTP4-209ENST00000567235 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
UTP4-209ENST00000567235 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
UTP4-209ENST00000567235 PBRM1Q86U86 1689 aa26.55■■□□□ 1.84
UTP4-209ENST00000567235 VPS8Q8N3P4 1428 aa26.49■■□□□ 1.83
UTP4-209ENST00000567235 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
UTP4-209ENST00000567235 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
UTP4-209ENST00000567235 CTTNBP2Q8WZ74 1663 aa26.45■■□□□ 1.82
UTP4-209ENST00000567235 AQRO60306 1485 aaKnown RBP eCLIP26.43■■□□□ 1.821e-10■■■■■ 30.1
UTP4-209ENST00000567235 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
UTP4-209ENST00000567235 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
UTP4-209ENST00000567235 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
UTP4-209ENST00000567235 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
UTP4-209ENST00000567235 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
UTP4-209ENST00000567235 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
UTP4-209ENST00000567235 PCGF6Q9BYE7 350 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms