RNA–Protein interactions for RNA: ENST00000563428.5

TAF1C-208, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

TSL 2

Gene TAF1C, Length 2,531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-208ENST00000563428 NISCHQ9Y2I1 1504 aa36■■■■□ 3.35
TAF1C-208ENST00000563428 CCDC180Q9P1Z9 1646 aa31.01■■■□□ 2.56
TAF1C-208ENST00000563428 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
TAF1C-208ENST00000563428 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
TAF1C-208ENST00000563428 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
TAF1C-208ENST00000563428 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
TAF1C-208ENST00000563428 ABCC9O60706 1549 aa29.51■■■□□ 2.31
TAF1C-208ENST00000563428 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
TAF1C-208ENST00000563428 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
TAF1C-208ENST00000563428 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
TAF1C-208ENST00000563428 NACADO15069 1562 aa28.88■■■□□ 2.21
TAF1C-208ENST00000563428 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
TAF1C-208ENST00000563428 RSF1Q96T23 1441 aaPredicted RBP28.15■■■□□ 2.1
TAF1C-208ENST00000563428 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
TAF1C-208ENST00000563428 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.1
TAF1C-208ENST00000563428 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.085e-7■■■□□ 15.9
TAF1C-208ENST00000563428 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
TAF1C-208ENST00000563428 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
TAF1C-208ENST00000563428 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
TAF1C-208ENST00000563428 WIZO95785 1651 aa27.76■■■□□ 2.03
TAF1C-208ENST00000563428 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
TAF1C-208ENST00000563428 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
TAF1C-208ENST00000563428 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
TAF1C-208ENST00000563428 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
TAF1C-208ENST00000563428 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
TAF1C-208ENST00000563428 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
TAF1C-208ENST00000563428 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
TAF1C-208ENST00000563428 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
TAF1C-208ENST00000563428 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
TAF1C-208ENST00000563428 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
TAF1C-208ENST00000563428 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
TAF1C-208ENST00000563428 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
TAF1C-208ENST00000563428 HRCP23327 699 aa26.9■■□□□ 1.9
TAF1C-208ENST00000563428 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
TAF1C-208ENST00000563428 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
TAF1C-208ENST00000563428 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
TAF1C-208ENST00000563428 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
TAF1C-208ENST00000563428 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
TAF1C-208ENST00000563428 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
TAF1C-208ENST00000563428 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
TAF1C-208ENST00000563428 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
TAF1C-208ENST00000563428 SOGA1O94964 1423 aa26.4■■□□□ 1.82
TAF1C-208ENST00000563428 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
TAF1C-208ENST00000563428 RUSC2Q8N2Y8 1516 aa26.31■■□□□ 1.8
TAF1C-208ENST00000563428 CFTRP13569 1480 aa26.27■■□□□ 1.8
TAF1C-208ENST00000563428 TRIM26Q12899 539 aaPredicted RBP26.22■■□□□ 1.79
TAF1C-208ENST00000563428 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
TAF1C-208ENST00000563428 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
TAF1C-208ENST00000563428 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
TAF1C-208ENST00000563428 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
TAF1C-208ENST00000563428 EEA1Q15075 1411 aa26.09■■□□□ 1.77
TAF1C-208ENST00000563428 CUX1P39880 1505 aa26.07■■□□□ 1.76
TAF1C-208ENST00000563428 UBTFP17480 764 aaKnown RBP26.03■■□□□ 1.76
TAF1C-208ENST00000563428 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
TAF1C-208ENST00000563428 NESP48681 1621 aa26.01■■□□□ 1.75
TAF1C-208ENST00000563428 PRDM2Q13029 1718 aa26■■□□□ 1.75
TAF1C-208ENST00000563428 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
TAF1C-208ENST00000563428 GOLGA3Q08378 1498 aa25.89■■□□□ 1.73
TAF1C-208ENST00000563428 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
TAF1C-208ENST00000563428 CEP162Q5TB80 1403 aa25.86■■□□□ 1.73
TAF1C-208ENST00000563428 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
TAF1C-208ENST00000563428 RAPGEF2Q9Y4G8 1499 aa25.8■■□□□ 1.72
TAF1C-208ENST00000563428 RANGAP1P46060 587 aaPredicted RBP25.78■■□□□ 1.72
TAF1C-208ENST00000563428 KIF21BO75037 1637 aa25.77■■□□□ 1.72
TAF1C-208ENST00000563428 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
TAF1C-208ENST00000563428 KIF27Q86VH2 1401 aa25.75■■□□□ 1.71
TAF1C-208ENST00000563428 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
TAF1C-208ENST00000563428 CUX2O14529 1486 aa25.7■■□□□ 1.7
TAF1C-208ENST00000563428 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
TAF1C-208ENST00000563428 TOPBP1Q92547 1522 aa25.64■■□□□ 1.69
TAF1C-208ENST00000563428 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
TAF1C-208ENST00000563428 PRXQ9BXM0 1461 aa25.62■■□□□ 1.69
TAF1C-208ENST00000563428 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
TAF1C-208ENST00000563428 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
TAF1C-208ENST00000563428 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
TAF1C-208ENST00000563428 CLIP1P30622 1438 aa25.58■■□□□ 1.68
TAF1C-208ENST00000563428 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
TAF1C-208ENST00000563428 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
TAF1C-208ENST00000563428 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
TAF1C-208ENST00000563428 IGF1RP08069 1367 aa25.54■■□□□ 1.68
TAF1C-208ENST00000563428 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
TAF1C-208ENST00000563428 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
TAF1C-208ENST00000563428 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
TAF1C-208ENST00000563428 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
TAF1C-208ENST00000563428 VPS8Q8N3P4 1428 aa25.33■■□□□ 1.65
TAF1C-208ENST00000563428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
TAF1C-208ENST00000563428 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
TAF1C-208ENST00000563428 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
TAF1C-208ENST00000563428 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
TAF1C-208ENST00000563428 APLP2Q06481 763 aa25.24■■□□□ 1.63
TAF1C-208ENST00000563428 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TAF1C-208ENST00000563428 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
TAF1C-208ENST00000563428 ARHGAP35Q9NRY4 1499 aa25.19■■□□□ 1.62
TAF1C-208ENST00000563428 TARBP1Q13395 1621 aaKnown RBP25.17■■□□□ 1.62
TAF1C-208ENST00000563428 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
TAF1C-208ENST00000563428 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
TAF1C-208ENST00000563428 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.615e-8■■■■■ 37.5
TAF1C-208ENST00000563428 CUL7Q14999 1698 aa25.13■■□□□ 1.61
TAF1C-208ENST00000563428 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
TAF1C-208ENST00000563428 WDR62O43379 1518 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms