RNA–Protein interactions for RNA: ENST00000312055.9

CKAP5-201, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5 BASIC

Gene CKAP5, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-201ENST00000312055 NISCHQ9Y2I1 1504 aa7.29□□□□□ -1.24
CKAP5-201ENST00000312055 DCAF8L2P0C7V8 631 aa7.17□□□□□ -1.26
CKAP5-201ENST00000312055 SLC24A1O60721 1099 aa6.43□□□□□ -1.38
CKAP5-201ENST00000312055 CCDC180Q9P1Z9 1646 aa6.37□□□□□ -1.39
CKAP5-201ENST00000312055 SHROOM4Q9ULL8 1493 aa6.34□□□□□ -1.4
CKAP5-201ENST00000312055 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
CKAP5-201ENST00000312055 EHMT2Q96KQ7 1210 aa6.29□□□□□ -1.4
CKAP5-201ENST00000312055 FAM9AQ8IZU1 332 aaPredicted RBP6.26□□□□□ -1.41
CKAP5-201ENST00000312055 ZCCHC6Q5VYS8 1495 aaKnown RBP6.2□□□□□ -1.42
CKAP5-201ENST00000312055 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
CKAP5-201ENST00000312055 RANGAP1P46060 587 aaPredicted RBP6.13□□□□□ -1.43
CKAP5-201ENST00000312055 TTBK1Q5TCY1 1321 aaPredicted RBP6.11□□□□□ -1.43
CKAP5-201ENST00000312055 ATP1B4Q9UN42 357 aaPredicted RBP6.11□□□□□ -1.43
CKAP5-201ENST00000312055 MYO15BQ96JP2 1530 aa6.08□□□□□ -1.44
CKAP5-201ENST00000312055 ABCC9O60706 1549 aa6.07□□□□□ -1.44
CKAP5-201ENST00000312055 MYT1LQ9UL68 1186 aa6.07□□□□□ -1.44
CKAP5-201ENST00000312055 APLP2Q06481 763 aa6.05□□□□□ -1.44
CKAP5-201ENST00000312055 PABPN1Q86U42 306 aaKnown RBP eCLIP6.05□□□□□ -1.44
CKAP5-201ENST00000312055 CHIC1Q5VXU3 224 aa6.01□□□□□ -1.45
CKAP5-201ENST00000312055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.98□□□□□ -1.45
CKAP5-201ENST00000312055 HNRNPUL2Q1KMD3 747 aaKnown RBP5.98□□□□□ -1.45
CKAP5-201ENST00000312055 FBLN2P98095 1184 aa5.93□□□□□ -1.46
CKAP5-201ENST00000312055 MYT1Q01538 1121 aa5.87□□□□□ -1.47
CKAP5-201ENST00000312055 UBTFP17480 764 aaKnown RBP5.86□□□□□ -1.47
CKAP5-201ENST00000312055 PLPPR3Q6T4P5 718 aa5.84□□□□□ -1.47
CKAP5-201ENST00000312055 TRIM41Q8WV44 630 aa5.83□□□□□ -1.48
CKAP5-201ENST00000312055 NACADO15069 1562 aa5.82□□□□□ -1.48
CKAP5-201ENST00000312055 RTN4Q9NQC3 1192 aaKnown RBP5.77□□□□□ -1.49
CKAP5-201ENST00000312055 ERICH6Q7L0X2 663 aa5.77□□□□□ -1.49
CKAP5-201ENST00000312055 PELP1Q8IZL8 1130 aaKnown RBP5.76□□□□□ -1.49
CKAP5-201ENST00000312055 DAXXQ9UER7 740 aaPredicted RBP5.76□□□□□ -1.49
CKAP5-201ENST00000312055 BCANQ96GW7 911 aa5.72□□□□□ -1.49
CKAP5-201ENST00000312055 NPM1P06748 294 aaKnown RBP eCLIP5.71□□□□□ -1.5
CKAP5-201ENST00000312055 TRHP20396 242 aaPredicted RBP5.71□□□□□ -1.5
CKAP5-201ENST00000312055 UNC13AQ9UPW8 1703 aa5.71□□□□□ -1.5
CKAP5-201ENST00000312055 ESF1Q9H501 851 aaKnown RBP5.7□□□□□ -1.5
CKAP5-201ENST00000312055 SLC4A1APQ9BWU0 796 aaKnown RBP5.7□□□□□ -1.5
CKAP5-201ENST00000312055 ITGAEP38570 1179 aa5.69□□□□□ -1.5
CKAP5-201ENST00000312055 ARID3CA6NKF2 412 aa5.69□□□□□ -1.5
CKAP5-201ENST00000312055 RSF1Q96T23 1441 aaPredicted RBP5.68□□□□□ -1.5
CKAP5-201ENST00000312055 EIF4G1Q04637 1599 aaKnown RBP5.68□□□□□ -1.5
CKAP5-201ENST00000312055 PRKCSHP14314 528 aaPredicted RBP5.66□□□□□ -1.5
CKAP5-201ENST00000312055 RB1CC1Q8TDY2 1594 aa5.66□□□□□ -1.5
CKAP5-201ENST00000312055 AMER1Q5JTC6 1135 aaPredicted RBP5.66□□□□□ -1.5
CKAP5-201ENST00000312055 SCRIBQ14160 1630 aa5.65□□□□□ -1.5
CKAP5-201ENST00000312055 POLR3GLQ9BT43 218 aa5.65□□□□□ -1.51
CKAP5-201ENST00000312055 PEG3Q9GZU2 1588 aa5.64□□□□□ -1.51
CKAP5-201ENST00000312055 PPARGC1BQ86YN6 1023 aaKnown RBP5.63□□□□□ -1.51
CKAP5-201ENST00000312055 BICRAQ9NZM4 1560 aa5.63□□□□□ -1.51
CKAP5-201ENST00000312055 NCBP3Q53F19 620 aaKnown RBP5.62□□□□□ -1.51
CKAP5-201ENST00000312055 AEBP2Q6ZN18 517 aaPredicted RBP5.61□□□□□ -1.51
CKAP5-201ENST00000312055 BAZ1AQ9NRL2 1556 aaPredicted RBP5.61□□□□□ -1.51
CKAP5-201ENST00000312055 PCGF6Q9BYE7 350 aa5.61□□□□□ -1.51
CKAP5-201ENST00000312055 MROH2BQ7Z745 1585 aa5.61□□□□□ -1.51
CKAP5-201ENST00000312055 ERCC6Q03468 1493 aa5.59□□□□□ -1.51
CKAP5-201ENST00000312055 CECR2Q9BXF3 1484 aa5.59□□□□□ -1.51
CKAP5-201ENST00000312055 CNGB1Q14028 1251 aaPredicted RBP5.59□□□□□ -1.51
CKAP5-201ENST00000312055 P3H3Q8IVL6 736 aa5.58□□□□□ -1.52
CKAP5-201ENST00000312055 STAG3Q9UJ98 1225 aa5.58□□□□□ -1.52
CKAP5-201ENST00000312055 CHMP7Q8WUX9 453 aaPredicted RBP5.57□□□□□ -1.52
CKAP5-201ENST00000312055 ARID4BQ4LE39 1312 aaPredicted RBP5.57□□□□□ -1.52
CKAP5-201ENST00000312055 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
CKAP5-201ENST00000312055 SMARCA4P51532 1647 aa5.56□□□□□ -1.52
CKAP5-201ENST00000312055 SENP3Q9H4L4 574 aaPredicted RBP5.56□□□□□ -1.52
CKAP5-201ENST00000312055 WIZO95785 1651 aa5.55□□□□□ -1.52
CKAP5-201ENST00000312055 SCAF1Q9H7N4 1312 aaKnown RBP5.55□□□□□ -1.52
CKAP5-201ENST00000312055 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
CKAP5-201ENST00000312055 KCNA4P22459 653 aa5.53□□□□□ -1.52
CKAP5-201ENST00000312055 TRIM52Q96A61 297 aa5.53□□□□□ -1.52
CKAP5-201ENST00000312055 TOP2AP11388 1531 aaKnown RBP5.53□□□□□ -1.52
CKAP5-201ENST00000312055 CHGAP10645 457 aaKnown RBP5.52□□□□□ -1.53
CKAP5-201ENST00000312055 A0A0G2JS52 829 aa5.52□□□□□ -1.53
CKAP5-201ENST00000312055 TULP1O00294 542 aaPredicted RBP5.52□□□□□ -1.53
CKAP5-201ENST00000312055 PLEKHG5O94827 1062 aa5.52□□□□□ -1.53
CKAP5-201ENST00000312055 CCER1Q8TC90 406 aaPredicted RBP5.51□□□□□ -1.53
CKAP5-201ENST00000312055 SMARCA2P51531 1590 aa5.5□□□□□ -1.53
CKAP5-201ENST00000312055 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
CKAP5-201ENST00000312055 C14orf37Q86TY3 774 aa5.49□□□□□ -1.53
CKAP5-201ENST00000312055 ZNF326Q5BKZ1 582 aaKnown RBP5.48□□□□□ -1.53
CKAP5-201ENST00000312055 HAP1P54257 671 aaPredicted RBP5.48□□□□□ -1.53
CKAP5-201ENST00000312055 CDK11AQ9UQ88 783 aaPredicted RBP5.46□□□□□ -1.54
CKAP5-201ENST00000312055 TPRNQ4KMQ1 711 aa5.46□□□□□ -1.54
CKAP5-201ENST00000312055 TIMELESSQ9UNS1 1208 aa5.44□□□□□ -1.54
CKAP5-201ENST00000312055 CSRNP3Q8WYN3 585 aa5.44□□□□□ -1.54
CKAP5-201ENST00000312055 HOMEZQ8IX15 550 aa5.43□□□□□ -1.54
CKAP5-201ENST00000312055 EIF5BO60841 1220 aaKnown RBP5.43□□□□□ -1.54
CKAP5-201ENST00000312055 ARXQ96QS3 562 aa5.43□□□□□ -1.54
CKAP5-201ENST00000312055 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
CKAP5-201ENST00000312055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.43□□□□□ -1.541e-6■■■■□ 21.9
CKAP5-201ENST00000312055 CCDC88BA6NC98 1476 aa5.43□□□□□ -1.54
CKAP5-201ENST00000312055 MLECQ14165 292 aa5.42□□□□□ -1.54
CKAP5-201ENST00000312055 PODXL2Q9NZ53 605 aa5.42□□□□□ -1.54
CKAP5-201ENST00000312055 HMGXB3Q12766 1538 aa5.41□□□□□ -1.54
CKAP5-201ENST00000312055 NCAPD3P42695 1498 aa5.41□□□□□ -1.54
CKAP5-201ENST00000312055 PPP1R15AO75807 674 aaPredicted RBP5.41□□□□□ -1.54
CKAP5-201ENST00000312055 ATAD2BQ9ULI0 1458 aa5.41□□□□□ -1.54
CKAP5-201ENST00000312055 LOC105371045A0A1W2PR82 267 aa5.38□□□□□ -1.55
CKAP5-201ENST00000312055 NEUROD1Q13562 356 aa5.37□□□□□ -1.55
CKAP5-201ENST00000312055 TAOK2Q9UL54 1235 aa5.37□□□□□ -1.55
CKAP5-201ENST00000312055 CYB5RLQ6IPT4 315 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms