RNA–Protein interactions for RNA: ENST00000587119.5

SUGP1-206, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 2,177 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-206ENST00000587119 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
SUGP1-206ENST00000587119 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
SUGP1-206ENST00000587119 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
SUGP1-206ENST00000587119 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
SUGP1-206ENST00000587119 ABCC9O60706 1549 aa27.73■■■□□ 2.03
SUGP1-206ENST00000587119 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.03
SUGP1-206ENST00000587119 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
SUGP1-206ENST00000587119 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
SUGP1-206ENST00000587119 NACADO15069 1562 aa27.13■■□□□ 1.93
SUGP1-206ENST00000587119 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
SUGP1-206ENST00000587119 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
SUGP1-206ENST00000587119 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
SUGP1-206ENST00000587119 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
SUGP1-206ENST00000587119 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
SUGP1-206ENST00000587119 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
SUGP1-206ENST00000587119 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
SUGP1-206ENST00000587119 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.792e-6■■□□□ 13.9
SUGP1-206ENST00000587119 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
SUGP1-206ENST00000587119 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
SUGP1-206ENST00000587119 HRCP23327 699 aa25.91■■□□□ 1.74
SUGP1-206ENST00000587119 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.74
SUGP1-206ENST00000587119 WIZO95785 1651 aa25.88■■□□□ 1.73
SUGP1-206ENST00000587119 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
SUGP1-206ENST00000587119 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
SUGP1-206ENST00000587119 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
SUGP1-206ENST00000587119 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
SUGP1-206ENST00000587119 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
SUGP1-206ENST00000587119 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
SUGP1-206ENST00000587119 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
SUGP1-206ENST00000587119 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
SUGP1-206ENST00000587119 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
SUGP1-206ENST00000587119 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
SUGP1-206ENST00000587119 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
SUGP1-206ENST00000587119 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
SUGP1-206ENST00000587119 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
SUGP1-206ENST00000587119 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
SUGP1-206ENST00000587119 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
SUGP1-206ENST00000587119 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
SUGP1-206ENST00000587119 ZEB1P37275 1124 aaPredicted RBP24.98■■□□□ 1.59
SUGP1-206ENST00000587119 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
SUGP1-206ENST00000587119 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
SUGP1-206ENST00000587119 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
SUGP1-206ENST00000587119 CFTRP13569 1480 aa24.59■■□□□ 1.53
SUGP1-206ENST00000587119 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
SUGP1-206ENST00000587119 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
SUGP1-206ENST00000587119 EEA1Q15075 1411 aa24.55■■□□□ 1.52
SUGP1-206ENST00000587119 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
SUGP1-206ENST00000587119 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
SUGP1-206ENST00000587119 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
SUGP1-206ENST00000587119 NESP48681 1621 aa24.41■■□□□ 1.5
SUGP1-206ENST00000587119 SOGA1O94964 1423 aa24.41■■□□□ 1.5
SUGP1-206ENST00000587119 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
SUGP1-206ENST00000587119 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
SUGP1-206ENST00000587119 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
SUGP1-206ENST00000587119 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
SUGP1-206ENST00000587119 CUX1P39880 1505 aa24.34■■□□□ 1.49
SUGP1-206ENST00000587119 BIVM-ERCC5R4GMW8 1640 aa24.32■■□□□ 1.48
SUGP1-206ENST00000587119 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
SUGP1-206ENST00000587119 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
SUGP1-206ENST00000587119 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
SUGP1-206ENST00000587119 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
SUGP1-206ENST00000587119 KIF21BO75037 1637 aa24.18■■□□□ 1.46
SUGP1-206ENST00000587119 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
SUGP1-206ENST00000587119 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.45
SUGP1-206ENST00000587119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
SUGP1-206ENST00000587119 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
SUGP1-206ENST00000587119 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
SUGP1-206ENST00000587119 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
SUGP1-206ENST00000587119 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
SUGP1-206ENST00000587119 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
SUGP1-206ENST00000587119 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
SUGP1-206ENST00000587119 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
SUGP1-206ENST00000587119 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
SUGP1-206ENST00000587119 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
SUGP1-206ENST00000587119 CLIP1P30622 1438 aa23.91■■□□□ 1.42
SUGP1-206ENST00000587119 CUX2O14529 1486 aa23.9■■□□□ 1.42
SUGP1-206ENST00000587119 KIF27Q86VH2 1401 aa23.89■■□□□ 1.42
SUGP1-206ENST00000587119 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.41
SUGP1-206ENST00000587119 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
SUGP1-206ENST00000587119 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
SUGP1-206ENST00000587119 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
SUGP1-206ENST00000587119 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
SUGP1-206ENST00000587119 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
SUGP1-206ENST00000587119 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
SUGP1-206ENST00000587119 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.39
SUGP1-206ENST00000587119 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
SUGP1-206ENST00000587119 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
SUGP1-206ENST00000587119 IGF1RP08069 1367 aa23.74■■□□□ 1.39
SUGP1-206ENST00000587119 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
SUGP1-206ENST00000587119 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
SUGP1-206ENST00000587119 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
SUGP1-206ENST00000587119 APLP2Q06481 763 aa23.66■■□□□ 1.38
SUGP1-206ENST00000587119 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
SUGP1-206ENST00000587119 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
SUGP1-206ENST00000587119 WDR62O43379 1518 aa23.63■■□□□ 1.37
SUGP1-206ENST00000587119 ZNF316A6NFI3 1004 aaPredicted RBP23.62■■□□□ 1.37
SUGP1-206ENST00000587119 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
SUGP1-206ENST00000587119 RANGAP1P46060 587 aaPredicted RBP23.61■■□□□ 1.37
SUGP1-206ENST00000587119 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
SUGP1-206ENST00000587119 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms