RNA–Protein interactions for RNA: ENST00000487697.1

LRCH4-207, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-207ENST00000487697 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
LRCH4-207ENST00000487697 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
LRCH4-207ENST00000487697 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
LRCH4-207ENST00000487697 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
LRCH4-207ENST00000487697 ABCC9O60706 1549 aa21.34■■□□□ 1.01
LRCH4-207ENST00000487697 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
LRCH4-207ENST00000487697 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
LRCH4-207ENST00000487697 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
LRCH4-207ENST00000487697 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
LRCH4-207ENST00000487697 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
LRCH4-207ENST00000487697 NACADO15069 1562 aa20.11■□□□□ 0.81
LRCH4-207ENST00000487697 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
LRCH4-207ENST00000487697 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
LRCH4-207ENST00000487697 KCNA4P22459 653 aa19.93■□□□□ 0.78
LRCH4-207ENST00000487697 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
LRCH4-207ENST00000487697 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
LRCH4-207ENST00000487697 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
LRCH4-207ENST00000487697 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
LRCH4-207ENST00000487697 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
LRCH4-207ENST00000487697 RTN4Q9NQC3 1192 aaKnown RBP19.78■□□□□ 0.76
LRCH4-207ENST00000487697 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
LRCH4-207ENST00000487697 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
LRCH4-207ENST00000487697 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
LRCH4-207ENST00000487697 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
LRCH4-207ENST00000487697 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
LRCH4-207ENST00000487697 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
LRCH4-207ENST00000487697 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
LRCH4-207ENST00000487697 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
LRCH4-207ENST00000487697 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
LRCH4-207ENST00000487697 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
LRCH4-207ENST00000487697 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
LRCH4-207ENST00000487697 ADRA2BP18089 450 aa18.84■□□□□ 0.61
LRCH4-207ENST00000487697 DAXXQ9UER7 740 aaPredicted RBP18.82■□□□□ 0.6
LRCH4-207ENST00000487697 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
LRCH4-207ENST00000487697 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
LRCH4-207ENST00000487697 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
LRCH4-207ENST00000487697 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
LRCH4-207ENST00000487697 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
LRCH4-207ENST00000487697 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
LRCH4-207ENST00000487697 CUX2O14529 1486 aa18.41■□□□□ 0.54
LRCH4-207ENST00000487697 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
LRCH4-207ENST00000487697 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
LRCH4-207ENST00000487697 BCANQ96GW7 911 aa18.39■□□□□ 0.53
LRCH4-207ENST00000487697 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
LRCH4-207ENST00000487697 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
LRCH4-207ENST00000487697 ZBTB22O15209 634 aa18.31■□□□□ 0.52
LRCH4-207ENST00000487697 NESP48681 1621 aa18.3■□□□□ 0.52
LRCH4-207ENST00000487697 ARXQ96QS3 562 aa18.28■□□□□ 0.52
LRCH4-207ENST00000487697 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
LRCH4-207ENST00000487697 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
LRCH4-207ENST00000487697 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
LRCH4-207ENST00000487697 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
LRCH4-207ENST00000487697 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
LRCH4-207ENST00000487697 PLCB2Q00722 1185 aa18.16■□□□□ 0.5
LRCH4-207ENST00000487697 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
LRCH4-207ENST00000487697 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
LRCH4-207ENST00000487697 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
LRCH4-207ENST00000487697 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
LRCH4-207ENST00000487697 WIZO95785 1651 aa18.03■□□□□ 0.48
LRCH4-207ENST00000487697 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
LRCH4-207ENST00000487697 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
LRCH4-207ENST00000487697 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
LRCH4-207ENST00000487697 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
LRCH4-207ENST00000487697 FKBP8Q14318 412 aa17.92■□□□□ 0.46
LRCH4-207ENST00000487697 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
LRCH4-207ENST00000487697 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
LRCH4-207ENST00000487697 WDR62O43379 1518 aa17.87■□□□□ 0.45
LRCH4-207ENST00000487697 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
LRCH4-207ENST00000487697 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
LRCH4-207ENST00000487697 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
LRCH4-207ENST00000487697 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
LRCH4-207ENST00000487697 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
LRCH4-207ENST00000487697 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
LRCH4-207ENST00000487697 CFTRP13569 1480 aa17.76■□□□□ 0.43
LRCH4-207ENST00000487697 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
LRCH4-207ENST00000487697 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
LRCH4-207ENST00000487697 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
LRCH4-207ENST00000487697 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
LRCH4-207ENST00000487697 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
LRCH4-207ENST00000487697 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
LRCH4-207ENST00000487697 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
LRCH4-207ENST00000487697 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
LRCH4-207ENST00000487697 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
LRCH4-207ENST00000487697 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
LRCH4-207ENST00000487697 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
LRCH4-207ENST00000487697 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
LRCH4-207ENST00000487697 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
LRCH4-207ENST00000487697 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
LRCH4-207ENST00000487697 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
LRCH4-207ENST00000487697 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
LRCH4-207ENST00000487697 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
LRCH4-207ENST00000487697 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
LRCH4-207ENST00000487697 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
LRCH4-207ENST00000487697 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
LRCH4-207ENST00000487697 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
LRCH4-207ENST00000487697 CHD1O14646 1710 aa17.28■□□□□ 0.36
LRCH4-207ENST00000487697 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
LRCH4-207ENST00000487697 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.367e-11■■■■□ 23.2
LRCH4-207ENST00000487697 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
LRCH4-207ENST00000487697 FBLN2P98095 1184 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms