RNA–Protein interactions for RNA: ENST00000314423.11

UTP4-201, Transcript of UTP4, small subunit processome component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UTP4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-201ENST00000314423 NISCHQ9Y2I1 1504 aa42.39■■■■■ 4.38
UTP4-201ENST00000314423 CCDC180Q9P1Z9 1646 aa36.35■■■■□ 3.41
UTP4-201ENST00000314423 ZCCHC6Q5VYS8 1495 aaKnown RBP35.78■■■■□ 3.32
UTP4-201ENST00000314423 SHROOM4Q9ULL8 1493 aa35.56■■■■□ 3.28
UTP4-201ENST00000314423 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
UTP4-201ENST00000314423 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
UTP4-201ENST00000314423 SUPT5HO00267 1087 aaKnown RBP34.64■■■■□ 3.14
UTP4-201ENST00000314423 MYO15BQ96JP2 1530 aa34.1■■■■□ 3.05
UTP4-201ENST00000314423 ABCC9O60706 1549 aa33.95■■■■□ 3.03
UTP4-201ENST00000314423 SCRIBQ14160 1630 aa33.85■■■■□ 3.01
UTP4-201ENST00000314423 NACADO15069 1562 aa33.72■■■□□ 2.99
UTP4-201ENST00000314423 CHIC1Q5VXU3 224 aa33.51■■■□□ 2.95
UTP4-201ENST00000314423 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
UTP4-201ENST00000314423 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.91
UTP4-201ENST00000314423 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
UTP4-201ENST00000314423 MROH2BQ7Z745 1585 aa32.88■■■□□ 2.85
UTP4-201ENST00000314423 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
UTP4-201ENST00000314423 WIZO95785 1651 aa32.64■■■□□ 2.82
UTP4-201ENST00000314423 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
UTP4-201ENST00000314423 LOC105371045A0A1W2PR82 267 aa32.39■■■□□ 2.78
UTP4-201ENST00000314423 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
UTP4-201ENST00000314423 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
UTP4-201ENST00000314423 BICRAQ9NZM4 1560 aa32.33■■■□□ 2.77
UTP4-201ENST00000314423 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
UTP4-201ENST00000314423 TOP2AP11388 1531 aaKnown RBP32.22■■■□□ 2.75
UTP4-201ENST00000314423 EIF4G1Q04637 1599 aaKnown RBP32.06■■■□□ 2.72
UTP4-201ENST00000314423 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
UTP4-201ENST00000314423 SMARCA2P51531 1590 aa31.99■■■□□ 2.71
UTP4-201ENST00000314423 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
UTP4-201ENST00000314423 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
UTP4-201ENST00000314423 PCGF6Q9BYE7 350 aa31.84■■■□□ 2.69
UTP4-201ENST00000314423 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
UTP4-201ENST00000314423 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
UTP4-201ENST00000314423 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
UTP4-201ENST00000314423 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
UTP4-201ENST00000314423 HRCP23327 699 aa31.54■■■□□ 2.64
UTP4-201ENST00000314423 TRIM26Q12899 539 aaPredicted RBP31.46■■■□□ 2.63
UTP4-201ENST00000314423 SOGA1O94964 1423 aa31.32■■■□□ 2.6
UTP4-201ENST00000314423 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.6
UTP4-201ENST00000314423 EEA1Q15075 1411 aa31.2■■■□□ 2.59
UTP4-201ENST00000314423 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
UTP4-201ENST00000314423 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
UTP4-201ENST00000314423 RUSC2Q8N2Y8 1516 aa31.17■■■□□ 2.58
UTP4-201ENST00000314423 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
UTP4-201ENST00000314423 CSRNP3Q8WYN3 585 aa31.13■■■□□ 2.57
UTP4-201ENST00000314423 TNIKQ9UKE5 1360 aa30.99■■■□□ 2.55
UTP4-201ENST00000314423 CEP162Q5TB80 1403 aa30.97■■■□□ 2.55
UTP4-201ENST00000314423 GOLGA3Q08378 1498 aa30.91■■■□□ 2.54
UTP4-201ENST00000314423 PPARGC1BQ86YN6 1023 aaKnown RBP30.9■■■□□ 2.54
UTP4-201ENST00000314423 UBTFP17480 764 aaKnown RBP30.9■■■□□ 2.54
UTP4-201ENST00000314423 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
UTP4-201ENST00000314423 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
UTP4-201ENST00000314423 CFTRP13569 1480 aa30.79■■■□□ 2.52
UTP4-201ENST00000314423 KIF21BO75037 1637 aa30.77■■■□□ 2.52
UTP4-201ENST00000314423 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
UTP4-201ENST00000314423 CUX1P39880 1505 aa30.66■■■□□ 2.5
UTP4-201ENST00000314423 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
UTP4-201ENST00000314423 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
UTP4-201ENST00000314423 ZEB1P37275 1124 aaPredicted RBP30.57■■■□□ 2.48
UTP4-201ENST00000314423 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
UTP4-201ENST00000314423 CLIP1P30622 1438 aa30.51■■■□□ 2.47
UTP4-201ENST00000314423 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.47
UTP4-201ENST00000314423 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
UTP4-201ENST00000314423 PRXQ9BXM0 1461 aa30.43■■■□□ 2.46
UTP4-201ENST00000314423 KIF27Q86VH2 1401 aa30.42■■■□□ 2.46
UTP4-201ENST00000314423 ERICH3Q5RHP9 1530 aa30.39■■■□□ 2.46
UTP4-201ENST00000314423 VPS8Q8N3P4 1428 aa30.33■■■□□ 2.45
UTP4-201ENST00000314423 RANGAP1P46060 587 aaPredicted RBP30.31■■■□□ 2.44
UTP4-201ENST00000314423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.24■■■□□ 2.43
UTP4-201ENST00000314423 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
UTP4-201ENST00000314423 CUX2O14529 1486 aa30.2■■■□□ 2.42
UTP4-201ENST00000314423 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.42
UTP4-201ENST00000314423 CCER1Q8TC90 406 aaPredicted RBP30.15■■■□□ 2.42
UTP4-201ENST00000314423 APLP2Q06481 763 aa30.12■■■□□ 2.41
UTP4-201ENST00000314423 IGF1RP08069 1367 aa30.11■■■□□ 2.41
UTP4-201ENST00000314423 NESP48681 1621 aa30.1■■■□□ 2.41
UTP4-201ENST00000314423 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
UTP4-201ENST00000314423 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.4
UTP4-201ENST00000314423 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.39
UTP4-201ENST00000314423 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
UTP4-201ENST00000314423 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
UTP4-201ENST00000314423 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
UTP4-201ENST00000314423 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
UTP4-201ENST00000314423 POLA1P09884 1462 aaPredicted RBP29.92■■■□□ 2.38
UTP4-201ENST00000314423 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
UTP4-201ENST00000314423 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
UTP4-201ENST00000314423 ABCA10Q8WWZ4 1543 aa29.88■■■□□ 2.37
UTP4-201ENST00000314423 HNRNPUL2Q1KMD3 747 aaKnown RBP29.85■■■□□ 2.37
UTP4-201ENST00000314423 URB2Q14146 1524 aaKnown RBP29.8■■■□□ 2.36
UTP4-201ENST00000314423 KANK4Q5T7N3 995 aaPredicted RBP29.79■■■□□ 2.36
UTP4-201ENST00000314423 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
UTP4-201ENST00000314423 CUL7Q14999 1698 aa29.62■■■□□ 2.33
UTP4-201ENST00000314423 WDR97A6NE52 1622 aa29.62■■■□□ 2.33
UTP4-201ENST00000314423 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
UTP4-201ENST00000314423 TDRD9Q8NDG6 1382 aaKnown RBP29.57■■■□□ 2.32
UTP4-201ENST00000314423 RRBP1Q9P2E9 1410 aaKnown RBP29.55■■■□□ 2.32
UTP4-201ENST00000314423 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
UTP4-201ENST00000314423 P3H3Q8IVL6 736 aa29.51■■■□□ 2.31
UTP4-201ENST00000314423 FHAD1B1AJZ9 1412 aa29.51■■■□□ 2.31
UTP4-201ENST00000314423 MAP3K1Q13233 1512 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms