RNA–Protein interactions for RNA: ENST00000568448.1

UTP4-213, Transcript of UTP4, small subunit processome component, humanhuman

TSL 4

Gene UTP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-213ENST00000568448 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.61
UTP4-213ENST00000568448 ABCC9O60706 1549 aa35.93■■■■□ 3.34
UTP4-213ENST00000568448 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
UTP4-213ENST00000568448 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
UTP4-213ENST00000568448 RB1CC1Q8TDY2 1594 aa33.42■■■□□ 2.94
UTP4-213ENST00000568448 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
UTP4-213ENST00000568448 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
UTP4-213ENST00000568448 NACADO15069 1562 aa32.79■■■□□ 2.84
UTP4-213ENST00000568448 DCAF8L2P0C7V8 631 aa32.69■■■□□ 2.82
UTP4-213ENST00000568448 UNC13AQ9UPW8 1703 aa32.66■■■□□ 2.82
UTP4-213ENST00000568448 BICRAQ9NZM4 1560 aa32.52■■■□□ 2.8
UTP4-213ENST00000568448 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
UTP4-213ENST00000568448 CC2D2AQ9P2K1 1620 aa32.29■■■□□ 2.76
UTP4-213ENST00000568448 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
UTP4-213ENST00000568448 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
UTP4-213ENST00000568448 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
UTP4-213ENST00000568448 CUX2O14529 1486 aa31.4■■■□□ 2.62
UTP4-213ENST00000568448 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
UTP4-213ENST00000568448 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
UTP4-213ENST00000568448 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
UTP4-213ENST00000568448 ZCCHC6Q5VYS8 1495 aaKnown RBP30.86■■■□□ 2.53
UTP4-213ENST00000568448 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
UTP4-213ENST00000568448 NESP48681 1621 aa30.46■■■□□ 2.47
UTP4-213ENST00000568448 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.44
UTP4-213ENST00000568448 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
UTP4-213ENST00000568448 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
UTP4-213ENST00000568448 ATAD2BQ9ULI0 1458 aa30.07■■■□□ 2.4
UTP4-213ENST00000568448 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.38
UTP4-213ENST00000568448 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
UTP4-213ENST00000568448 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
UTP4-213ENST00000568448 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
UTP4-213ENST00000568448 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
UTP4-213ENST00000568448 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
UTP4-213ENST00000568448 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
UTP4-213ENST00000568448 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
UTP4-213ENST00000568448 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
UTP4-213ENST00000568448 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
UTP4-213ENST00000568448 RIMBP3CA6NJZ7 1639 aa29.59■■■□□ 2.33
UTP4-213ENST00000568448 RIMBP3BA6NNM3 1639 aa29.59■■■□□ 2.33
UTP4-213ENST00000568448 RIMBP3Q9UFD9 1639 aa29.59■■■□□ 2.33
UTP4-213ENST00000568448 WDR62O43379 1518 aa29.55■■■□□ 2.32
UTP4-213ENST00000568448 TRHP20396 242 aaPredicted RBP29.53■■■□□ 2.32
UTP4-213ENST00000568448 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
UTP4-213ENST00000568448 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
UTP4-213ENST00000568448 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
UTP4-213ENST00000568448 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
UTP4-213ENST00000568448 CEP164Q9UPV0 1460 aa29.23■■■□□ 2.27
UTP4-213ENST00000568448 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
UTP4-213ENST00000568448 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
UTP4-213ENST00000568448 ARAP1Q96P48 1450 aa28.97■■■□□ 2.23
UTP4-213ENST00000568448 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
UTP4-213ENST00000568448 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
UTP4-213ENST00000568448 CFTRP13569 1480 aa28.71■■■□□ 2.19
UTP4-213ENST00000568448 IFT140Q96RY7 1462 aa28.67■■■□□ 2.18
UTP4-213ENST00000568448 WIZO95785 1651 aa28.65■■■□□ 2.18
UTP4-213ENST00000568448 FBLN2P98095 1184 aa28.65■■■□□ 2.18
UTP4-213ENST00000568448 ILDR1Q86SU0 546 aaPredicted RBP28.65■■■□□ 2.18
UTP4-213ENST00000568448 CHD1O14646 1710 aa28.64■■■□□ 2.18
UTP4-213ENST00000568448 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
UTP4-213ENST00000568448 EIF4G3O43432 1585 aaKnown RBP28.56■■■□□ 2.16
UTP4-213ENST00000568448 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.141e-10■■■■■ 30.1
UTP4-213ENST00000568448 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
UTP4-213ENST00000568448 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
UTP4-213ENST00000568448 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
UTP4-213ENST00000568448 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
UTP4-213ENST00000568448 GAPVD1Q14C86 1478 aa28.11■■■□□ 2.09
UTP4-213ENST00000568448 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
UTP4-213ENST00000568448 TOP2AP11388 1531 aaKnown RBP28.1■■■□□ 2.09
UTP4-213ENST00000568448 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
UTP4-213ENST00000568448 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
UTP4-213ENST00000568448 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
UTP4-213ENST00000568448 SNAPC4Q5SXM2 1469 aa28.07■■■□□ 2.08
UTP4-213ENST00000568448 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
UTP4-213ENST00000568448 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
UTP4-213ENST00000568448 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
UTP4-213ENST00000568448 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
UTP4-213ENST00000568448 SOGA1O94964 1423 aa27.86■■■□□ 2.05
UTP4-213ENST00000568448 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
UTP4-213ENST00000568448 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
UTP4-213ENST00000568448 KIF13AQ9H1H9 1805 aa27.81■■■□□ 2.04
UTP4-213ENST00000568448 SYNJ2O15056 1496 aa27.8■■■□□ 2.04
UTP4-213ENST00000568448 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
UTP4-213ENST00000568448 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
UTP4-213ENST00000568448 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
UTP4-213ENST00000568448 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
UTP4-213ENST00000568448 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
UTP4-213ENST00000568448 KDM6BO15054 1643 aa27.56■■■□□ 2
UTP4-213ENST00000568448 CEP170Q5SW79 1584 aa27.54■■■□□ 2
UTP4-213ENST00000568448 PBRM1Q86U86 1689 aa27.53■■■□□ 2
UTP4-213ENST00000568448 ABCC10Q5T3U5 1492 aa27.48■■□□□ 1.99
UTP4-213ENST00000568448 HECW2Q9P2P5 1572 aa27.47■■□□□ 1.99
UTP4-213ENST00000568448 FBXO41Q8TF61 875 aa27.39■■□□□ 1.98
UTP4-213ENST00000568448 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
UTP4-213ENST00000568448 NPM1P06748 294 aaKnown RBP eCLIP27.38■■□□□ 1.97
UTP4-213ENST00000568448 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
UTP4-213ENST00000568448 DIP2BQ9P265 1576 aa27.37■■□□□ 1.97
UTP4-213ENST00000568448 CUX1P39880 1505 aa27.36■■□□□ 1.97
UTP4-213ENST00000568448 TSPOAP1O95153 1857 aa27.35■■□□□ 1.97
UTP4-213ENST00000568448 SHROOM2Q13796 1616 aa27.32■■□□□ 1.96
UTP4-213ENST00000568448 NUP160Q12769 1436 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms