RNA–Protein interactions for RNA: ENST00000578579.2

ACADVL-213, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 458 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-213ENST00000578579 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
ACADVL-213ENST00000578579 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
ACADVL-213ENST00000578579 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
ACADVL-213ENST00000578579 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
ACADVL-213ENST00000578579 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
ACADVL-213ENST00000578579 NISCHQ9Y2I1 1504 aa12.52□□□□□ -0.4
ACADVL-213ENST00000578579 FOXD1Q16676 465 aa12.46□□□□□ -0.41
ACADVL-213ENST00000578579 MSH5O43196 834 aa11.81□□□□□ -0.52
ACADVL-213ENST00000578579 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
ACADVL-213ENST00000578579 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
ACADVL-213ENST00000578579 ADRA2BP18089 450 aa11.17□□□□□ -0.62
ACADVL-213ENST00000578579 CCDC180Q9P1Z9 1646 aa11.07□□□□□ -0.64
ACADVL-213ENST00000578579 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
ACADVL-213ENST00000578579 ABCC9O60706 1549 aa10.68□□□□□ -0.7
ACADVL-213ENST00000578579 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
ACADVL-213ENST00000578579 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
ACADVL-213ENST00000578579 ZCCHC6Q5VYS8 1495 aaKnown RBP10.46□□□□□ -0.74
ACADVL-213ENST00000578579 DMRT2Q9Y5R5 561 aa10.39□□□□□ -0.75
ACADVL-213ENST00000578579 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
ACADVL-213ENST00000578579 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
ACADVL-213ENST00000578579 NACADO15069 1562 aa10.35□□□□□ -0.75
ACADVL-213ENST00000578579 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
ACADVL-213ENST00000578579 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
ACADVL-213ENST00000578579 DNAJC5BQ9UF47 199 aa10.23□□□□□ -0.77
ACADVL-213ENST00000578579 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.77
ACADVL-213ENST00000578579 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
ACADVL-213ENST00000578579 SCRIBQ14160 1630 aa10.12□□□□□ -0.79
ACADVL-213ENST00000578579 DCAF8L1A6NGE4 600 aa10.11□□□□□ -0.79
ACADVL-213ENST00000578579 BICRAQ9NZM4 1560 aa10.07□□□□□ -0.8
ACADVL-213ENST00000578579 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
ACADVL-213ENST00000578579 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.817e-8■■□□□ 11.6
ACADVL-213ENST00000578579 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
ACADVL-213ENST00000578579 C1QBPQ07021 282 aaKnown RBP9.85□□□□□ -0.83
ACADVL-213ENST00000578579 POTEHQ6S545 545 aa9.78□□□□□ -0.84
ACADVL-213ENST00000578579 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.85
ACADVL-213ENST00000578579 CECR2Q9BXF3 1484 aa9.77□□□□□ -0.85
ACADVL-213ENST00000578579 EIF4G1Q04637 1599 aaKnown RBP9.75□□□□□ -0.85
ACADVL-213ENST00000578579 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
ACADVL-213ENST00000578579 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
ACADVL-213ENST00000578579 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
ACADVL-213ENST00000578579 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
ACADVL-213ENST00000578579 WIZO95785 1651 aa9.61□□□□□ -0.87
ACADVL-213ENST00000578579 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
ACADVL-213ENST00000578579 PEG3Q9GZU2 1588 aa9.59□□□□□ -0.87
ACADVL-213ENST00000578579 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
ACADVL-213ENST00000578579 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
ACADVL-213ENST00000578579 PPP4R3CPQ6ZMV5 832 aa9.56□□□□□ -0.88
ACADVL-213ENST00000578579 SMARCA2P51531 1590 aa9.55□□□□□ -0.88
ACADVL-213ENST00000578579 NCAPD3P42695 1498 aa9.54□□□□□ -0.88
ACADVL-213ENST00000578579 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
ACADVL-213ENST00000578579 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
ACADVL-213ENST00000578579 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
ACADVL-213ENST00000578579 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
ACADVL-213ENST00000578579 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
ACADVL-213ENST00000578579 SUPT5HO00267 1087 aaKnown RBP9.45□□□□□ -0.9
ACADVL-213ENST00000578579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.37□□□□□ -0.911e-9■□□□□ 10.7
ACADVL-213ENST00000578579 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
ACADVL-213ENST00000578579 NESP48681 1621 aa9.31□□□□□ -0.92
ACADVL-213ENST00000578579 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
ACADVL-213ENST00000578579 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
ACADVL-213ENST00000578579 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
ACADVL-213ENST00000578579 CFTRP13569 1480 aa9.26□□□□□ -0.93
ACADVL-213ENST00000578579 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
ACADVL-213ENST00000578579 DSG3P32926 999 aa9.24□□□□□ -0.93
ACADVL-213ENST00000578579 CUX2O14529 1486 aa9.2□□□□□ -0.94
ACADVL-213ENST00000578579 CAPN15O75808 1086 aa9.18□□□□□ -0.94
ACADVL-213ENST00000578579 SPINK5Q9NQ38 1064 aaPredicted RBP9.18□□□□□ -0.94
ACADVL-213ENST00000578579 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
ACADVL-213ENST00000578579 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
ACADVL-213ENST00000578579 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
ACADVL-213ENST00000578579 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
ACADVL-213ENST00000578579 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
ACADVL-213ENST00000578579 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
ACADVL-213ENST00000578579 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
ACADVL-213ENST00000578579 ABCC8Q09428 1581 aa9.09□□□□□ -0.95
ACADVL-213ENST00000578579 WDR62O43379 1518 aa9.07□□□□□ -0.96
ACADVL-213ENST00000578579 U3KPZ7 1027 aaPredicted RBP9.07□□□□□ -0.96
ACADVL-213ENST00000578579 CUX1P39880 1505 aa9.06□□□□□ -0.96
ACADVL-213ENST00000578579 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
ACADVL-213ENST00000578579 SYNJ1O43426 1573 aa9.05□□□□□ -0.96
ACADVL-213ENST00000578579 DNMBPQ6XZF7 1577 aa9.05□□□□□ -0.96
ACADVL-213ENST00000578579 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
ACADVL-213ENST00000578579 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
ACADVL-213ENST00000578579 TOP2BQ02880 1626 aa9.02□□□□□ -0.97
ACADVL-213ENST00000578579 FGD5Q6ZNL6 1462 aa8.99□□□□□ -0.97
ACADVL-213ENST00000578579 POLA1P09884 1462 aaPredicted RBP8.98□□□□□ -0.97
ACADVL-213ENST00000578579 TARBP1Q13395 1621 aaKnown RBP8.98□□□□□ -0.97
ACADVL-213ENST00000578579 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.97
ACADVL-213ENST00000578579 WDR97A6NE52 1622 aa8.96□□□□□ -0.98
ACADVL-213ENST00000578579 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
ACADVL-213ENST00000578579 ABCB7O75027 752 aa8.94□□□□□ -0.98
ACADVL-213ENST00000578579 SOGA1O94964 1423 aa8.93□□□□□ -0.98
ACADVL-213ENST00000578579 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
ACADVL-213ENST00000578579 IFT140Q96RY7 1462 aa8.92□□□□□ -0.98
ACADVL-213ENST00000578579 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
ACADVL-213ENST00000578579 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
ACADVL-213ENST00000578579 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.99
ACADVL-213ENST00000578579 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
ACADVL-213ENST00000578579 ABCA5Q8WWZ7 1642 aa8.88□□□□□ -0.99
ACADVL-213ENST00000578579 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.992e-8■■■■□ 19.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms