RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
SUGP1-201ENST00000247001 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
SUGP1-201ENST00000247001 ABCC9O60706 1549 aa23.85■■□□□ 1.41
SUGP1-201ENST00000247001 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
SUGP1-201ENST00000247001 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
SUGP1-201ENST00000247001 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
SUGP1-201ENST00000247001 NACADO15069 1562 aa22.62■■□□□ 1.21
SUGP1-201ENST00000247001 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
SUGP1-201ENST00000247001 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
SUGP1-201ENST00000247001 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.182e-6■■□□□ 13.9
SUGP1-201ENST00000247001 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
SUGP1-201ENST00000247001 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
SUGP1-201ENST00000247001 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
SUGP1-201ENST00000247001 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
SUGP1-201ENST00000247001 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
SUGP1-201ENST00000247001 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SUGP1-201ENST00000247001 EIF4G1Q04637 1599 aaKnown RBP21.5■■□□□ 1.03
SUGP1-201ENST00000247001 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
SUGP1-201ENST00000247001 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
SUGP1-201ENST00000247001 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
SUGP1-201ENST00000247001 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
SUGP1-201ENST00000247001 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
SUGP1-201ENST00000247001 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SUGP1-201ENST00000247001 WIZO95785 1651 aa21.08■□□□□ 0.96
SUGP1-201ENST00000247001 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
SUGP1-201ENST00000247001 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
SUGP1-201ENST00000247001 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
SUGP1-201ENST00000247001 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
SUGP1-201ENST00000247001 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SUGP1-201ENST00000247001 HMGXB3Q12766 1538 aa20.77■□□□□ 0.91
SUGP1-201ENST00000247001 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
SUGP1-201ENST00000247001 NESP48681 1621 aa20.68■□□□□ 0.9
SUGP1-201ENST00000247001 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
SUGP1-201ENST00000247001 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
SUGP1-201ENST00000247001 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
SUGP1-201ENST00000247001 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
SUGP1-201ENST00000247001 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.84
SUGP1-201ENST00000247001 TRIM41Q8WV44 630 aa20.33■□□□□ 0.84
SUGP1-201ENST00000247001 CFTRP13569 1480 aa20.27■□□□□ 0.84
SUGP1-201ENST00000247001 KIF21AQ7Z4S6 1674 aa20.27■□□□□ 0.84
SUGP1-201ENST00000247001 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
SUGP1-201ENST00000247001 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
SUGP1-201ENST00000247001 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
SUGP1-201ENST00000247001 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
SUGP1-201ENST00000247001 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
SUGP1-201ENST00000247001 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
SUGP1-201ENST00000247001 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
SUGP1-201ENST00000247001 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
SUGP1-201ENST00000247001 CUX2O14529 1486 aa20.02■□□□□ 0.8
SUGP1-201ENST00000247001 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
SUGP1-201ENST00000247001 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
SUGP1-201ENST00000247001 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
SUGP1-201ENST00000247001 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
SUGP1-201ENST00000247001 WDR62O43379 1518 aa19.95■□□□□ 0.78
SUGP1-201ENST00000247001 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
SUGP1-201ENST00000247001 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
SUGP1-201ENST00000247001 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
SUGP1-201ENST00000247001 SOGA1O94964 1423 aa19.84■□□□□ 0.77
SUGP1-201ENST00000247001 TOP2BQ02880 1626 aa19.83■□□□□ 0.76
SUGP1-201ENST00000247001 CUX1P39880 1505 aa19.81■□□□□ 0.76
SUGP1-201ENST00000247001 BIVM-ERCC5R4GMW8 1640 aa19.79■□□□□ 0.76
SUGP1-201ENST00000247001 RUSC2Q8N2Y8 1516 aa19.78■□□□□ 0.76
SUGP1-201ENST00000247001 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
SUGP1-201ENST00000247001 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
SUGP1-201ENST00000247001 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
SUGP1-201ENST00000247001 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
SUGP1-201ENST00000247001 HRCP23327 699 aa19.72■□□□□ 0.75
SUGP1-201ENST00000247001 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
SUGP1-201ENST00000247001 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.743e-6■■■■□ 23.7
SUGP1-201ENST00000247001 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
SUGP1-201ENST00000247001 IFT140Q96RY7 1462 aa19.65■□□□□ 0.74
SUGP1-201ENST00000247001 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.74
SUGP1-201ENST00000247001 EEA1Q15075 1411 aa19.63■□□□□ 0.73
SUGP1-201ENST00000247001 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
SUGP1-201ENST00000247001 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
SUGP1-201ENST00000247001 FBLN2P98095 1184 aa19.55■□□□□ 0.72
SUGP1-201ENST00000247001 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
SUGP1-201ENST00000247001 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
SUGP1-201ENST00000247001 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
SUGP1-201ENST00000247001 MYT1Q01538 1121 aa19.49■□□□□ 0.71
SUGP1-201ENST00000247001 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
SUGP1-201ENST00000247001 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
SUGP1-201ENST00000247001 KIF21BO75037 1637 aa19.43■□□□□ 0.7
SUGP1-201ENST00000247001 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
SUGP1-201ENST00000247001 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
SUGP1-201ENST00000247001 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
SUGP1-201ENST00000247001 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.7
SUGP1-201ENST00000247001 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
SUGP1-201ENST00000247001 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
SUGP1-201ENST00000247001 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
SUGP1-201ENST00000247001 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
SUGP1-201ENST00000247001 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
SUGP1-201ENST00000247001 CEP162Q5TB80 1403 aa19.33■□□□□ 0.69
SUGP1-201ENST00000247001 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
SUGP1-201ENST00000247001 IGF1RP08069 1367 aa19.32■□□□□ 0.68
SUGP1-201ENST00000247001 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
SUGP1-201ENST00000247001 CHD1O14646 1710 aa19.29■□□□□ 0.68
SUGP1-201ENST00000247001 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
SUGP1-201ENST00000247001 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
SUGP1-201ENST00000247001 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms