RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
POLR1C-208ENST00000488601 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
POLR1C-208ENST00000488601 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
POLR1C-208ENST00000488601 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
POLR1C-208ENST00000488601 ABCC9O60706 1549 aa17.83■□□□□ 0.45
POLR1C-208ENST00000488601 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
POLR1C-208ENST00000488601 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
POLR1C-208ENST00000488601 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
POLR1C-208ENST00000488601 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
POLR1C-208ENST00000488601 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
POLR1C-208ENST00000488601 CUX2O14529 1486 aa16.21■□□□□ 0.19
POLR1C-208ENST00000488601 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
POLR1C-208ENST00000488601 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
POLR1C-208ENST00000488601 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
POLR1C-208ENST00000488601 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
POLR1C-208ENST00000488601 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
POLR1C-208ENST00000488601 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
POLR1C-208ENST00000488601 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
POLR1C-208ENST00000488601 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
POLR1C-208ENST00000488601 NACADO15069 1562 aa15.6■□□□□ 0.09
POLR1C-208ENST00000488601 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
POLR1C-208ENST00000488601 ERCC6Q03468 1493 aa15.52■□□□□ 0.08
POLR1C-208ENST00000488601 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
POLR1C-208ENST00000488601 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
POLR1C-208ENST00000488601 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
POLR1C-208ENST00000488601 SOCS7O14512 581 aa15.16■□□□□ 0.02
POLR1C-208ENST00000488601 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
POLR1C-208ENST00000488601 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
POLR1C-208ENST00000488601 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
POLR1C-208ENST00000488601 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
POLR1C-208ENST00000488601 LMTK3Q96Q04 1460 aa15.08■□□□□ 0.01
POLR1C-208ENST00000488601 FOXD1Q16676 465 aa15.01□□□□□ -0.01
POLR1C-208ENST00000488601 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
POLR1C-208ENST00000488601 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
POLR1C-208ENST00000488601 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
POLR1C-208ENST00000488601 ADRA2BP18089 450 aa14.92□□□□□ -0.02
POLR1C-208ENST00000488601 FBXO41Q8TF61 875 aa14.92□□□□□ -0.02
POLR1C-208ENST00000488601 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
POLR1C-208ENST00000488601 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
POLR1C-208ENST00000488601 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
POLR1C-208ENST00000488601 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
POLR1C-208ENST00000488601 NESP48681 1621 aa14.79□□□□□ -0.04
POLR1C-208ENST00000488601 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
POLR1C-208ENST00000488601 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
POLR1C-208ENST00000488601 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
POLR1C-208ENST00000488601 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
POLR1C-208ENST00000488601 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
POLR1C-208ENST00000488601 DISP3Q9P2K9 1392 aa14.58□□□□□ -0.08
POLR1C-208ENST00000488601 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
POLR1C-208ENST00000488601 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.1
POLR1C-208ENST00000488601 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
POLR1C-208ENST00000488601 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
POLR1C-208ENST00000488601 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
POLR1C-208ENST00000488601 WDR62O43379 1518 aa14.39□□□□□ -0.11
POLR1C-208ENST00000488601 KCNA4P22459 653 aa14.38□□□□□ -0.11
POLR1C-208ENST00000488601 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
POLR1C-208ENST00000488601 PIAS4Q8N2W9 510 aaPredicted RBP14.28□□□□□ -0.12
POLR1C-208ENST00000488601 SYNJ2O15056 1496 aa14.26□□□□□ -0.13
POLR1C-208ENST00000488601 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
POLR1C-208ENST00000488601 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
POLR1C-208ENST00000488601 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
POLR1C-208ENST00000488601 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
POLR1C-208ENST00000488601 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
POLR1C-208ENST00000488601 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
POLR1C-208ENST00000488601 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
POLR1C-208ENST00000488601 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
POLR1C-208ENST00000488601 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
POLR1C-208ENST00000488601 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
POLR1C-208ENST00000488601 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
POLR1C-208ENST00000488601 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
POLR1C-208ENST00000488601 CHD1O14646 1710 aa13.87□□□□□ -0.19
POLR1C-208ENST00000488601 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
POLR1C-208ENST00000488601 KDM6BO15054 1643 aa13.83□□□□□ -0.2
POLR1C-208ENST00000488601 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
POLR1C-208ENST00000488601 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
POLR1C-208ENST00000488601 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
POLR1C-208ENST00000488601 FBLN2P98095 1184 aa13.8□□□□□ -0.2
POLR1C-208ENST00000488601 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
POLR1C-208ENST00000488601 CLASP1Q7Z460 1538 aa13.76□□□□□ -0.21
POLR1C-208ENST00000488601 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
POLR1C-208ENST00000488601 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
POLR1C-208ENST00000488601 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
POLR1C-208ENST00000488601 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
POLR1C-208ENST00000488601 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
POLR1C-208ENST00000488601 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
POLR1C-208ENST00000488601 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
POLR1C-208ENST00000488601 MSH5O43196 834 aa13.64□□□□□ -0.23
POLR1C-208ENST00000488601 ABCC10Q5T3U5 1492 aa13.63□□□□□ -0.23
POLR1C-208ENST00000488601 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
POLR1C-208ENST00000488601 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
POLR1C-208ENST00000488601 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
POLR1C-208ENST00000488601 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
POLR1C-208ENST00000488601 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
POLR1C-208ENST00000488601 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.244e-6■□□□□ 10.8
POLR1C-208ENST00000488601 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
POLR1C-208ENST00000488601 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
POLR1C-208ENST00000488601 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
POLR1C-208ENST00000488601 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
POLR1C-208ENST00000488601 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
POLR1C-208ENST00000488601 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms