RNA–Protein interactions for RNA: ENST00000567015.5

UTP4-208, Transcript of UTP4, small subunit processome component, humanhuman

TSL 2

Gene UTP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-208ENST00000567015 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
UTP4-208ENST00000567015 CCDC180Q9P1Z9 1646 aa26.02■■□□□ 1.76
UTP4-208ENST00000567015 ABCC9O60706 1549 aa25.47■■□□□ 1.67
UTP4-208ENST00000567015 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
UTP4-208ENST00000567015 NACADO15069 1562 aa24.5■■□□□ 1.51
UTP4-208ENST00000567015 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
UTP4-208ENST00000567015 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
UTP4-208ENST00000567015 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
UTP4-208ENST00000567015 DCAF1Q9Y4B6 1507 aa24.21■■□□□ 1.47
UTP4-208ENST00000567015 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
UTP4-208ENST00000567015 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
UTP4-208ENST00000567015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
UTP4-208ENST00000567015 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
UTP4-208ENST00000567015 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
UTP4-208ENST00000567015 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
UTP4-208ENST00000567015 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
UTP4-208ENST00000567015 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
UTP4-208ENST00000567015 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
UTP4-208ENST00000567015 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
UTP4-208ENST00000567015 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
UTP4-208ENST00000567015 BAZ1AQ9NRL2 1556 aaPredicted RBP22.61■■□□□ 1.21
UTP4-208ENST00000567015 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
UTP4-208ENST00000567015 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
UTP4-208ENST00000567015 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
UTP4-208ENST00000567015 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
UTP4-208ENST00000567015 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
UTP4-208ENST00000567015 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
UTP4-208ENST00000567015 WIZO95785 1651 aa22.17■■□□□ 1.14
UTP4-208ENST00000567015 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
UTP4-208ENST00000567015 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
UTP4-208ENST00000567015 NESP48681 1621 aa22.02■■□□□ 1.11
UTP4-208ENST00000567015 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
UTP4-208ENST00000567015 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
UTP4-208ENST00000567015 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
UTP4-208ENST00000567015 CUX2O14529 1486 aa21.87■■□□□ 1.09
UTP4-208ENST00000567015 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
UTP4-208ENST00000567015 CFTRP13569 1480 aa21.78■■□□□ 1.08
UTP4-208ENST00000567015 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
UTP4-208ENST00000567015 THOC2Q8NI27 1593 aaKnown RBP21.77■■□□□ 1.08
UTP4-208ENST00000567015 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
UTP4-208ENST00000567015 FANCD2Q9BXW9 1451 aa21.63■■□□□ 1.05
UTP4-208ENST00000567015 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
UTP4-208ENST00000567015 CEP164Q9UPV0 1460 aa21.59■■□□□ 1.05
UTP4-208ENST00000567015 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
UTP4-208ENST00000567015 WDR62O43379 1518 aa21.59■■□□□ 1.05
UTP4-208ENST00000567015 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
UTP4-208ENST00000567015 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
UTP4-208ENST00000567015 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
UTP4-208ENST00000567015 ABCC8Q09428 1581 aa21.32■■□□□ 1
UTP4-208ENST00000567015 TOPBP1Q92547 1522 aa21.29■■□□□ 1
UTP4-208ENST00000567015 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
UTP4-208ENST00000567015 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
UTP4-208ENST00000567015 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
UTP4-208ENST00000567015 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
UTP4-208ENST00000567015 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
UTP4-208ENST00000567015 CUX1P39880 1505 aa21.06■□□□□ 0.96
UTP4-208ENST00000567015 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
UTP4-208ENST00000567015 SOGA1O94964 1423 aa20.99■□□□□ 0.95
UTP4-208ENST00000567015 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
UTP4-208ENST00000567015 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
UTP4-208ENST00000567015 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
UTP4-208ENST00000567015 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.941e-10■■■■■ 30.1
UTP4-208ENST00000567015 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
UTP4-208ENST00000567015 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
UTP4-208ENST00000567015 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
UTP4-208ENST00000567015 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
UTP4-208ENST00000567015 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
UTP4-208ENST00000567015 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
UTP4-208ENST00000567015 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
UTP4-208ENST00000567015 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
UTP4-208ENST00000567015 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
UTP4-208ENST00000567015 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
UTP4-208ENST00000567015 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
UTP4-208ENST00000567015 CHD1O14646 1710 aa20.74■□□□□ 0.91
UTP4-208ENST00000567015 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
UTP4-208ENST00000567015 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
UTP4-208ENST00000567015 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
UTP4-208ENST00000567015 FBLN2P98095 1184 aa20.6■□□□□ 0.89
UTP4-208ENST00000567015 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
UTP4-208ENST00000567015 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
UTP4-208ENST00000567015 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.88
UTP4-208ENST00000567015 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
UTP4-208ENST00000567015 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
UTP4-208ENST00000567015 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
UTP4-208ENST00000567015 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
UTP4-208ENST00000567015 ADAMTS12P58397 1594 aa20.54■□□□□ 0.88
UTP4-208ENST00000567015 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.87
UTP4-208ENST00000567015 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
UTP4-208ENST00000567015 NUP160Q12769 1436 aa20.46■□□□□ 0.87
UTP4-208ENST00000567015 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
UTP4-208ENST00000567015 IGF1RP08069 1367 aa20.43■□□□□ 0.86
UTP4-208ENST00000567015 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
UTP4-208ENST00000567015 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
UTP4-208ENST00000567015 ARAP1Q96P48 1450 aa20.39■□□□□ 0.85
UTP4-208ENST00000567015 CUL7Q14999 1698 aa20.34■□□□□ 0.85
UTP4-208ENST00000567015 SHROOM2Q13796 1616 aa20.33■□□□□ 0.84
UTP4-208ENST00000567015 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
UTP4-208ENST00000567015 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
UTP4-208ENST00000567015 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
UTP4-208ENST00000567015 ERCC6L2Q5T890 1561 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms