RNA–Protein interactions for RNA: ENST00000341690.10

TAF1C-201, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TAF1C, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-201ENST00000341690 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
TAF1C-201ENST00000341690 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
TAF1C-201ENST00000341690 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
TAF1C-201ENST00000341690 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
TAF1C-201ENST00000341690 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
TAF1C-201ENST00000341690 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
TAF1C-201ENST00000341690 ABCC9O60706 1549 aa21.89■■□□□ 1.1
TAF1C-201ENST00000341690 SCRIBQ14160 1630 aa21.43■■□□□ 1.02
TAF1C-201ENST00000341690 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
TAF1C-201ENST00000341690 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
TAF1C-201ENST00000341690 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
TAF1C-201ENST00000341690 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.984e-7■■■□□ 16.9
TAF1C-201ENST00000341690 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.97
TAF1C-201ENST00000341690 LOC105371045A0A1W2PR82 267 aa20.96■□□□□ 0.95
TAF1C-201ENST00000341690 NACADO15069 1562 aa20.9■□□□□ 0.94
TAF1C-201ENST00000341690 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.93
TAF1C-201ENST00000341690 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
TAF1C-201ENST00000341690 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
TAF1C-201ENST00000341690 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
TAF1C-201ENST00000341690 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
TAF1C-201ENST00000341690 MROH2BQ7Z745 1585 aa20.64■□□□□ 0.89
TAF1C-201ENST00000341690 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
TAF1C-201ENST00000341690 WIZO95785 1651 aa20.47■□□□□ 0.87
TAF1C-201ENST00000341690 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
TAF1C-201ENST00000341690 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
TAF1C-201ENST00000341690 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
TAF1C-201ENST00000341690 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
TAF1C-201ENST00000341690 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
TAF1C-201ENST00000341690 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
TAF1C-201ENST00000341690 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
TAF1C-201ENST00000341690 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
TAF1C-201ENST00000341690 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
TAF1C-201ENST00000341690 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
TAF1C-201ENST00000341690 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
TAF1C-201ENST00000341690 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
TAF1C-201ENST00000341690 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
TAF1C-201ENST00000341690 HRCP23327 699 aa19.9■□□□□ 0.78
TAF1C-201ENST00000341690 SMARCA2P51531 1590 aa19.89■□□□□ 0.78
TAF1C-201ENST00000341690 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
TAF1C-201ENST00000341690 SOGA1O94964 1423 aa19.87■□□□□ 0.77
TAF1C-201ENST00000341690 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
TAF1C-201ENST00000341690 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
TAF1C-201ENST00000341690 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
TAF1C-201ENST00000341690 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
TAF1C-201ENST00000341690 APLP2Q06481 763 aa19.62■□□□□ 0.73
TAF1C-201ENST00000341690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
TAF1C-201ENST00000341690 CEP162Q5TB80 1403 aa19.54■□□□□ 0.72
TAF1C-201ENST00000341690 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
TAF1C-201ENST00000341690 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
TAF1C-201ENST00000341690 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
TAF1C-201ENST00000341690 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
TAF1C-201ENST00000341690 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
TAF1C-201ENST00000341690 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
TAF1C-201ENST00000341690 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
TAF1C-201ENST00000341690 GOLGA3Q08378 1498 aa19.4■□□□□ 0.7
TAF1C-201ENST00000341690 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
TAF1C-201ENST00000341690 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
TAF1C-201ENST00000341690 EEA1Q15075 1411 aa19.37■□□□□ 0.69
TAF1C-201ENST00000341690 CLIP1P30622 1438 aa19.34■□□□□ 0.69
TAF1C-201ENST00000341690 ITGAEP38570 1179 aa19.33■□□□□ 0.69
TAF1C-201ENST00000341690 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.68
TAF1C-201ENST00000341690 CC2D2AQ9P2K1 1620 aa19.3■□□□□ 0.68
TAF1C-201ENST00000341690 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
TAF1C-201ENST00000341690 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
TAF1C-201ENST00000341690 ZEB1P37275 1124 aaPredicted RBP19.25■□□□□ 0.67
TAF1C-201ENST00000341690 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
TAF1C-201ENST00000341690 NESP48681 1621 aa19.24■□□□□ 0.67
TAF1C-201ENST00000341690 CUX2O14529 1486 aa19.22■□□□□ 0.67
TAF1C-201ENST00000341690 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
TAF1C-201ENST00000341690 CFTRP13569 1480 aa19.21■□□□□ 0.67
TAF1C-201ENST00000341690 CUX1P39880 1505 aa19.19■□□□□ 0.66
TAF1C-201ENST00000341690 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
TAF1C-201ENST00000341690 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
TAF1C-201ENST00000341690 ARID3CA6NKF2 412 aa19.09■□□□□ 0.65
TAF1C-201ENST00000341690 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
TAF1C-201ENST00000341690 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
TAF1C-201ENST00000341690 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
TAF1C-201ENST00000341690 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
TAF1C-201ENST00000341690 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
TAF1C-201ENST00000341690 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.63
TAF1C-201ENST00000341690 IGF1RP08069 1367 aa19■□□□□ 0.63
TAF1C-201ENST00000341690 FBLN2P98095 1184 aa18.98■□□□□ 0.63
TAF1C-201ENST00000341690 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
TAF1C-201ENST00000341690 KIF21BO75037 1637 aa18.95■□□□□ 0.62
TAF1C-201ENST00000341690 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
TAF1C-201ENST00000341690 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
TAF1C-201ENST00000341690 ARAP1Q96P48 1450 aa18.86■□□□□ 0.61
TAF1C-201ENST00000341690 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
TAF1C-201ENST00000341690 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
TAF1C-201ENST00000341690 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
TAF1C-201ENST00000341690 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
TAF1C-201ENST00000341690 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.59
TAF1C-201ENST00000341690 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
TAF1C-201ENST00000341690 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
TAF1C-201ENST00000341690 DIEXFQ68CQ4 756 aaKnown RBP18.73■□□□□ 0.59
TAF1C-201ENST00000341690 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
TAF1C-201ENST00000341690 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.595e-8■■■■■ 37.5
TAF1C-201ENST00000341690 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
TAF1C-201ENST00000341690 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
TAF1C-201ENST00000341690 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms