RNA–Protein interactions for RNA: ENST00000423780.1

POLR1C-204, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 5

Gene POLR1C, Length 418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-204ENST00000423780 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
POLR1C-204ENST00000423780 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
POLR1C-204ENST00000423780 ABCC9O60706 1549 aa27.96■■■□□ 2.07
POLR1C-204ENST00000423780 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
POLR1C-204ENST00000423780 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
POLR1C-204ENST00000423780 NACADO15069 1562 aa26.67■■□□□ 1.86
POLR1C-204ENST00000423780 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
POLR1C-204ENST00000423780 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
POLR1C-204ENST00000423780 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
POLR1C-204ENST00000423780 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
POLR1C-204ENST00000423780 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
POLR1C-204ENST00000423780 BICRAQ9NZM4 1560 aa25.98■■□□□ 1.75
POLR1C-204ENST00000423780 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
POLR1C-204ENST00000423780 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
POLR1C-204ENST00000423780 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
POLR1C-204ENST00000423780 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
POLR1C-204ENST00000423780 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
POLR1C-204ENST00000423780 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
POLR1C-204ENST00000423780 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
POLR1C-204ENST00000423780 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
POLR1C-204ENST00000423780 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
POLR1C-204ENST00000423780 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
POLR1C-204ENST00000423780 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
POLR1C-204ENST00000423780 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
POLR1C-204ENST00000423780 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
POLR1C-204ENST00000423780 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
POLR1C-204ENST00000423780 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
POLR1C-204ENST00000423780 WIZO95785 1651 aa24.24■■□□□ 1.47
POLR1C-204ENST00000423780 NESP48681 1621 aa24.15■■□□□ 1.46
POLR1C-204ENST00000423780 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
POLR1C-204ENST00000423780 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
POLR1C-204ENST00000423780 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
POLR1C-204ENST00000423780 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
POLR1C-204ENST00000423780 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
POLR1C-204ENST00000423780 CUX2O14529 1486 aa23.87■■□□□ 1.41
POLR1C-204ENST00000423780 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
POLR1C-204ENST00000423780 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
POLR1C-204ENST00000423780 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
POLR1C-204ENST00000423780 CFTRP13569 1480 aa23.71■■□□□ 1.39
POLR1C-204ENST00000423780 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
POLR1C-204ENST00000423780 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
POLR1C-204ENST00000423780 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
POLR1C-204ENST00000423780 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
POLR1C-204ENST00000423780 WDR62O43379 1518 aa23.54■■□□□ 1.36
POLR1C-204ENST00000423780 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
POLR1C-204ENST00000423780 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
POLR1C-204ENST00000423780 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
POLR1C-204ENST00000423780 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
POLR1C-204ENST00000423780 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
POLR1C-204ENST00000423780 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
POLR1C-204ENST00000423780 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
POLR1C-204ENST00000423780 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
POLR1C-204ENST00000423780 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
POLR1C-204ENST00000423780 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
POLR1C-204ENST00000423780 CUX1P39880 1505 aa23■■□□□ 1.27
POLR1C-204ENST00000423780 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
POLR1C-204ENST00000423780 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
POLR1C-204ENST00000423780 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
POLR1C-204ENST00000423780 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
POLR1C-204ENST00000423780 SOGA1O94964 1423 aa22.94■■□□□ 1.26
POLR1C-204ENST00000423780 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.264e-6■□□□□ 10.8
POLR1C-204ENST00000423780 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
POLR1C-204ENST00000423780 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
POLR1C-204ENST00000423780 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
POLR1C-204ENST00000423780 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
POLR1C-204ENST00000423780 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
POLR1C-204ENST00000423780 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
POLR1C-204ENST00000423780 CHD1O14646 1710 aa22.72■■□□□ 1.23
POLR1C-204ENST00000423780 FBLN2P98095 1184 aa22.72■■□□□ 1.23
POLR1C-204ENST00000423780 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
POLR1C-204ENST00000423780 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
POLR1C-204ENST00000423780 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
POLR1C-204ENST00000423780 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
POLR1C-204ENST00000423780 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
POLR1C-204ENST00000423780 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
POLR1C-204ENST00000423780 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
POLR1C-204ENST00000423780 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
POLR1C-204ENST00000423780 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
POLR1C-204ENST00000423780 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
POLR1C-204ENST00000423780 RIMBP3CA6NJZ7 1639 aa22.55■■□□□ 1.2
POLR1C-204ENST00000423780 RIMBP3BA6NNM3 1639 aa22.55■■□□□ 1.2
POLR1C-204ENST00000423780 RIMBP3Q9UFD9 1639 aa22.55■■□□□ 1.2
POLR1C-204ENST00000423780 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
POLR1C-204ENST00000423780 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
POLR1C-204ENST00000423780 CLASP1Q7Z460 1538 aa22.44■■□□□ 1.18
POLR1C-204ENST00000423780 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
POLR1C-204ENST00000423780 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
POLR1C-204ENST00000423780 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
POLR1C-204ENST00000423780 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
POLR1C-204ENST00000423780 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
POLR1C-204ENST00000423780 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
POLR1C-204ENST00000423780 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
POLR1C-204ENST00000423780 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
POLR1C-204ENST00000423780 NUP160Q12769 1436 aa22.29■■□□□ 1.16
POLR1C-204ENST00000423780 IGF1RP08069 1367 aa22.26■■□□□ 1.15
POLR1C-204ENST00000423780 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
POLR1C-204ENST00000423780 CUL7Q14999 1698 aa22.16■■□□□ 1.14
POLR1C-204ENST00000423780 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
POLR1C-204ENST00000423780 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
POLR1C-204ENST00000423780 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms