RNA–Protein interactions for RNA: ENST00000512472.5

POLR1C-209, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-209ENST00000512472 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
POLR1C-209ENST00000512472 CCDC180Q9P1Z9 1646 aa30.51■■■□□ 2.48
POLR1C-209ENST00000512472 ABCC9O60706 1549 aa29.78■■■□□ 2.36
POLR1C-209ENST00000512472 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
POLR1C-209ENST00000512472 NACADO15069 1562 aa28.62■■■□□ 2.17
POLR1C-209ENST00000512472 MYO15BQ96JP2 1530 aa28.41■■■□□ 2.14
POLR1C-209ENST00000512472 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
POLR1C-209ENST00000512472 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
POLR1C-209ENST00000512472 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
POLR1C-209ENST00000512472 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
POLR1C-209ENST00000512472 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
POLR1C-209ENST00000512472 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
POLR1C-209ENST00000512472 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
POLR1C-209ENST00000512472 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
POLR1C-209ENST00000512472 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
POLR1C-209ENST00000512472 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
POLR1C-209ENST00000512472 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
POLR1C-209ENST00000512472 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
POLR1C-209ENST00000512472 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
POLR1C-209ENST00000512472 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
POLR1C-209ENST00000512472 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
POLR1C-209ENST00000512472 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
POLR1C-209ENST00000512472 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
POLR1C-209ENST00000512472 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
POLR1C-209ENST00000512472 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
POLR1C-209ENST00000512472 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
POLR1C-209ENST00000512472 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
POLR1C-209ENST00000512472 WIZO95785 1651 aa25.98■■□□□ 1.75
POLR1C-209ENST00000512472 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
POLR1C-209ENST00000512472 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
POLR1C-209ENST00000512472 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
POLR1C-209ENST00000512472 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
POLR1C-209ENST00000512472 NESP48681 1621 aa25.71■■□□□ 1.71
POLR1C-209ENST00000512472 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
POLR1C-209ENST00000512472 CUX2O14529 1486 aa25.55■■□□□ 1.68
POLR1C-209ENST00000512472 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
POLR1C-209ENST00000512472 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
POLR1C-209ENST00000512472 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
POLR1C-209ENST00000512472 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
POLR1C-209ENST00000512472 CFTRP13569 1480 aa25.38■■□□□ 1.65
POLR1C-209ENST00000512472 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
POLR1C-209ENST00000512472 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
POLR1C-209ENST00000512472 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
POLR1C-209ENST00000512472 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
POLR1C-209ENST00000512472 WDR62O43379 1518 aa25.24■■□□□ 1.63
POLR1C-209ENST00000512472 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
POLR1C-209ENST00000512472 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
POLR1C-209ENST00000512472 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
POLR1C-209ENST00000512472 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
POLR1C-209ENST00000512472 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
POLR1C-209ENST00000512472 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
POLR1C-209ENST00000512472 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
POLR1C-209ENST00000512472 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
POLR1C-209ENST00000512472 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
POLR1C-209ENST00000512472 EIF4G3O43432 1585 aaKnown RBP24.64■■□□□ 1.54
POLR1C-209ENST00000512472 CUX1P39880 1505 aa24.62■■□□□ 1.53
POLR1C-209ENST00000512472 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
POLR1C-209ENST00000512472 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
POLR1C-209ENST00000512472 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
POLR1C-209ENST00000512472 SOGA1O94964 1423 aa24.49■■□□□ 1.51
POLR1C-209ENST00000512472 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
POLR1C-209ENST00000512472 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
POLR1C-209ENST00000512472 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
POLR1C-209ENST00000512472 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
POLR1C-209ENST00000512472 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.54e-6■□□□□ 10.8
POLR1C-209ENST00000512472 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
POLR1C-209ENST00000512472 CHD1O14646 1710 aa24.37■■□□□ 1.49
POLR1C-209ENST00000512472 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
POLR1C-209ENST00000512472 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
POLR1C-209ENST00000512472 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
POLR1C-209ENST00000512472 TDRD9Q8NDG6 1382 aaKnown RBP24.32■■□□□ 1.48
POLR1C-209ENST00000512472 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
POLR1C-209ENST00000512472 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
POLR1C-209ENST00000512472 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
POLR1C-209ENST00000512472 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
POLR1C-209ENST00000512472 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
POLR1C-209ENST00000512472 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
POLR1C-209ENST00000512472 FBLN2P98095 1184 aa24.12■■□□□ 1.45
POLR1C-209ENST00000512472 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
POLR1C-209ENST00000512472 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
POLR1C-209ENST00000512472 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
POLR1C-209ENST00000512472 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
POLR1C-209ENST00000512472 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
POLR1C-209ENST00000512472 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
POLR1C-209ENST00000512472 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
POLR1C-209ENST00000512472 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
POLR1C-209ENST00000512472 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
POLR1C-209ENST00000512472 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
POLR1C-209ENST00000512472 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
POLR1C-209ENST00000512472 CUL7Q14999 1698 aa23.92■■□□□ 1.42
POLR1C-209ENST00000512472 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
POLR1C-209ENST00000512472 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
POLR1C-209ENST00000512472 NUP160Q12769 1436 aa23.86■■□□□ 1.41
POLR1C-209ENST00000512472 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
POLR1C-209ENST00000512472 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
POLR1C-209ENST00000512472 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
POLR1C-209ENST00000512472 IGF1RP08069 1367 aa23.73■■□□□ 1.39
POLR1C-209ENST00000512472 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
POLR1C-209ENST00000512472 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
POLR1C-209ENST00000512472 ERCC6L2Q5T890 1561 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms