RNA–Protein interactions for RNA: ENST00000455605.2

POLR1C-206, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 5

Gene POLR1C, Length 1,882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-206ENST00000455605 NISCHQ9Y2I1 1504 aa30.3■■■□□ 2.44
POLR1C-206ENST00000455605 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
POLR1C-206ENST00000455605 ABCC9O60706 1549 aa25.73■■□□□ 1.71
POLR1C-206ENST00000455605 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
POLR1C-206ENST00000455605 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
POLR1C-206ENST00000455605 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
POLR1C-206ENST00000455605 NACADO15069 1562 aa24.98■■□□□ 1.59
POLR1C-206ENST00000455605 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
POLR1C-206ENST00000455605 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.58
POLR1C-206ENST00000455605 SCRIBQ14160 1630 aa24.45■■□□□ 1.5
POLR1C-206ENST00000455605 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
POLR1C-206ENST00000455605 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
POLR1C-206ENST00000455605 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
POLR1C-206ENST00000455605 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
POLR1C-206ENST00000455605 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
POLR1C-206ENST00000455605 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
POLR1C-206ENST00000455605 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
POLR1C-206ENST00000455605 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
POLR1C-206ENST00000455605 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
POLR1C-206ENST00000455605 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
POLR1C-206ENST00000455605 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
POLR1C-206ENST00000455605 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
POLR1C-206ENST00000455605 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
POLR1C-206ENST00000455605 WIZO95785 1651 aa23.16■■□□□ 1.3
POLR1C-206ENST00000455605 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
POLR1C-206ENST00000455605 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
POLR1C-206ENST00000455605 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
POLR1C-206ENST00000455605 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
POLR1C-206ENST00000455605 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
POLR1C-206ENST00000455605 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
POLR1C-206ENST00000455605 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
POLR1C-206ENST00000455605 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
POLR1C-206ENST00000455605 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
POLR1C-206ENST00000455605 NESP48681 1621 aa22.42■■□□□ 1.18
POLR1C-206ENST00000455605 CFTRP13569 1480 aa22.4■■□□□ 1.18
POLR1C-206ENST00000455605 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
POLR1C-206ENST00000455605 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
POLR1C-206ENST00000455605 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
POLR1C-206ENST00000455605 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
POLR1C-206ENST00000455605 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
POLR1C-206ENST00000455605 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
POLR1C-206ENST00000455605 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
POLR1C-206ENST00000455605 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
POLR1C-206ENST00000455605 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
POLR1C-206ENST00000455605 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
POLR1C-206ENST00000455605 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
POLR1C-206ENST00000455605 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
POLR1C-206ENST00000455605 CUX1P39880 1505 aa21.89■■□□□ 1.1
POLR1C-206ENST00000455605 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
POLR1C-206ENST00000455605 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
POLR1C-206ENST00000455605 WDR62O43379 1518 aa21.87■■□□□ 1.09
POLR1C-206ENST00000455605 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
POLR1C-206ENST00000455605 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
POLR1C-206ENST00000455605 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
POLR1C-206ENST00000455605 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
POLR1C-206ENST00000455605 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
POLR1C-206ENST00000455605 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
POLR1C-206ENST00000455605 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
POLR1C-206ENST00000455605 CUX2O14529 1486 aa21.68■■□□□ 1.06
POLR1C-206ENST00000455605 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
POLR1C-206ENST00000455605 SOGA1O94964 1423 aa21.65■■□□□ 1.06
POLR1C-206ENST00000455605 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
POLR1C-206ENST00000455605 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
POLR1C-206ENST00000455605 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
POLR1C-206ENST00000455605 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
POLR1C-206ENST00000455605 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
POLR1C-206ENST00000455605 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
POLR1C-206ENST00000455605 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.034e-6■□□□□ 10.8
POLR1C-206ENST00000455605 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
POLR1C-206ENST00000455605 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
POLR1C-206ENST00000455605 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
POLR1C-206ENST00000455605 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
POLR1C-206ENST00000455605 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
POLR1C-206ENST00000455605 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
POLR1C-206ENST00000455605 GRIN2BQ13224 1484 aa21.32■■□□□ 1
POLR1C-206ENST00000455605 IGF1RP08069 1367 aa21.31■■□□□ 1
POLR1C-206ENST00000455605 PBRM1Q86U86 1689 aa21.31■■□□□ 1
POLR1C-206ENST00000455605 EEA1Q15075 1411 aa21.31■■□□□ 1
POLR1C-206ENST00000455605 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
POLR1C-206ENST00000455605 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
POLR1C-206ENST00000455605 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
POLR1C-206ENST00000455605 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
POLR1C-206ENST00000455605 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
POLR1C-206ENST00000455605 CUL7Q14999 1698 aa21.18■□□□□ 0.98
POLR1C-206ENST00000455605 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
POLR1C-206ENST00000455605 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
POLR1C-206ENST00000455605 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
POLR1C-206ENST00000455605 FBLN2P98095 1184 aa21.13■□□□□ 0.97
POLR1C-206ENST00000455605 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
POLR1C-206ENST00000455605 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
POLR1C-206ENST00000455605 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
POLR1C-206ENST00000455605 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
POLR1C-206ENST00000455605 KIF21BO75037 1637 aa21.06■□□□□ 0.96
POLR1C-206ENST00000455605 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
POLR1C-206ENST00000455605 CHD1O14646 1710 aa21.06■□□□□ 0.96
POLR1C-206ENST00000455605 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
POLR1C-206ENST00000455605 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
POLR1C-206ENST00000455605 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
POLR1C-206ENST00000455605 NUP160Q12769 1436 aa20.94■□□□□ 0.94
POLR1C-206ENST00000455605 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms