RNA–Protein interactions for RNA: ENST00000372344.6

POLR1C-202, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 5 BASIC

Gene POLR1C, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-202ENST00000372344 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
POLR1C-202ENST00000372344 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
POLR1C-202ENST00000372344 ABCC9O60706 1549 aa26.54■■□□□ 1.84
POLR1C-202ENST00000372344 RB1CC1Q8TDY2 1594 aa25.4■■□□□ 1.66
POLR1C-202ENST00000372344 NACADO15069 1562 aa25.27■■□□□ 1.64
POLR1C-202ENST00000372344 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
POLR1C-202ENST00000372344 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
POLR1C-202ENST00000372344 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
POLR1C-202ENST00000372344 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
POLR1C-202ENST00000372344 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
POLR1C-202ENST00000372344 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
POLR1C-202ENST00000372344 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
POLR1C-202ENST00000372344 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
POLR1C-202ENST00000372344 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
POLR1C-202ENST00000372344 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
POLR1C-202ENST00000372344 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
POLR1C-202ENST00000372344 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
POLR1C-202ENST00000372344 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
POLR1C-202ENST00000372344 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
POLR1C-202ENST00000372344 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
POLR1C-202ENST00000372344 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
POLR1C-202ENST00000372344 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
POLR1C-202ENST00000372344 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
POLR1C-202ENST00000372344 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
POLR1C-202ENST00000372344 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
POLR1C-202ENST00000372344 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
POLR1C-202ENST00000372344 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
POLR1C-202ENST00000372344 CUX2O14529 1486 aa22.95■■□□□ 1.26
POLR1C-202ENST00000372344 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
POLR1C-202ENST00000372344 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
POLR1C-202ENST00000372344 NESP48681 1621 aa22.78■■□□□ 1.24
POLR1C-202ENST00000372344 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
POLR1C-202ENST00000372344 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
POLR1C-202ENST00000372344 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
POLR1C-202ENST00000372344 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
POLR1C-202ENST00000372344 WIZO95785 1651 aa22.58■■□□□ 1.2
POLR1C-202ENST00000372344 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
POLR1C-202ENST00000372344 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
POLR1C-202ENST00000372344 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
POLR1C-202ENST00000372344 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
POLR1C-202ENST00000372344 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
POLR1C-202ENST00000372344 CFTRP13569 1480 aa22.35■■□□□ 1.17
POLR1C-202ENST00000372344 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
POLR1C-202ENST00000372344 WDR62O43379 1518 aa22.33■■□□□ 1.17
POLR1C-202ENST00000372344 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
POLR1C-202ENST00000372344 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
POLR1C-202ENST00000372344 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
POLR1C-202ENST00000372344 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
POLR1C-202ENST00000372344 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
POLR1C-202ENST00000372344 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
POLR1C-202ENST00000372344 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
POLR1C-202ENST00000372344 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
POLR1C-202ENST00000372344 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
POLR1C-202ENST00000372344 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
POLR1C-202ENST00000372344 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
POLR1C-202ENST00000372344 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
POLR1C-202ENST00000372344 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
POLR1C-202ENST00000372344 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
POLR1C-202ENST00000372344 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.054e-6■□□□□ 10.8
POLR1C-202ENST00000372344 SOGA1O94964 1423 aa21.62■■□□□ 1.05
POLR1C-202ENST00000372344 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
POLR1C-202ENST00000372344 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
POLR1C-202ENST00000372344 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
POLR1C-202ENST00000372344 FBLN2P98095 1184 aa21.53■■□□□ 1.04
POLR1C-202ENST00000372344 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
POLR1C-202ENST00000372344 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
POLR1C-202ENST00000372344 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
POLR1C-202ENST00000372344 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
POLR1C-202ENST00000372344 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
POLR1C-202ENST00000372344 CUX1P39880 1505 aa21.5■■□□□ 1.03
POLR1C-202ENST00000372344 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
POLR1C-202ENST00000372344 CHD1O14646 1710 aa21.46■■□□□ 1.03
POLR1C-202ENST00000372344 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
POLR1C-202ENST00000372344 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
POLR1C-202ENST00000372344 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
POLR1C-202ENST00000372344 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
POLR1C-202ENST00000372344 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
POLR1C-202ENST00000372344 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
POLR1C-202ENST00000372344 SYNJ2O15056 1496 aa21.34■■□□□ 1.01
POLR1C-202ENST00000372344 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
POLR1C-202ENST00000372344 SYNJ1O43426 1573 aa21.32■■□□□ 1
POLR1C-202ENST00000372344 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
POLR1C-202ENST00000372344 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
POLR1C-202ENST00000372344 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
POLR1C-202ENST00000372344 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
POLR1C-202ENST00000372344 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
POLR1C-202ENST00000372344 ABCA5Q8WWZ7 1642 aa21.23■□□□□ 0.99
POLR1C-202ENST00000372344 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
POLR1C-202ENST00000372344 BIVM-ERCC5R4GMW8 1640 aa21.2■□□□□ 0.98
POLR1C-202ENST00000372344 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
POLR1C-202ENST00000372344 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
POLR1C-202ENST00000372344 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
POLR1C-202ENST00000372344 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
POLR1C-202ENST00000372344 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
POLR1C-202ENST00000372344 NUP160Q12769 1436 aa21.05■□□□□ 0.96
POLR1C-202ENST00000372344 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
POLR1C-202ENST00000372344 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
POLR1C-202ENST00000372344 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
POLR1C-202ENST00000372344 JPH4Q96JJ6 628 aa20.89■□□□□ 0.93
POLR1C-202ENST00000372344 PRG4Q92954 1404 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms