RNA–Protein interactions for RNA: ENST00000480464.2

TARDBP-209, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-209ENST00000480464 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
TARDBP-209ENST00000480464 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
TARDBP-209ENST00000480464 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
TARDBP-209ENST00000480464 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
TARDBP-209ENST00000480464 FOXD1Q16676 465 aa23.61■■□□□ 1.37
TARDBP-209ENST00000480464 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
TARDBP-209ENST00000480464 MSH5O43196 834 aa22.45■■□□□ 1.18
TARDBP-209ENST00000480464 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
TARDBP-209ENST00000480464 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
TARDBP-209ENST00000480464 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
TARDBP-209ENST00000480464 ADRA2BP18089 450 aa21.62■■□□□ 1.05
TARDBP-209ENST00000480464 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
TARDBP-209ENST00000480464 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
TARDBP-209ENST00000480464 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
TARDBP-209ENST00000480464 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
TARDBP-209ENST00000480464 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
TARDBP-209ENST00000480464 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
TARDBP-209ENST00000480464 RNF39Q9H2S5 420 aa19.05■□□□□ 0.64
TARDBP-209ENST00000480464 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-209ENST00000480464 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
TARDBP-209ENST00000480464 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
TARDBP-209ENST00000480464 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
TARDBP-209ENST00000480464 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
TARDBP-209ENST00000480464 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
TARDBP-209ENST00000480464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
TARDBP-209ENST00000480464 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
TARDBP-209ENST00000480464 POTEHQ6S545 545 aa18.06■□□□□ 0.48
TARDBP-209ENST00000480464 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-209ENST00000480464 CAPN15O75808 1086 aa17.59■□□□□ 0.41
TARDBP-209ENST00000480464 KCNA4P22459 653 aa17.57■□□□□ 0.4
TARDBP-209ENST00000480464 DSG3P32926 999 aa17.57■□□□□ 0.4
TARDBP-209ENST00000480464 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
TARDBP-209ENST00000480464 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
TARDBP-209ENST00000480464 APLP2Q06481 763 aa17.29■□□□□ 0.36
TARDBP-209ENST00000480464 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-209ENST00000480464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-209ENST00000480464 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
TARDBP-209ENST00000480464 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-209ENST00000480464 ABCB7O75027 752 aa17.13■□□□□ 0.33
TARDBP-209ENST00000480464 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-209ENST00000480464 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
TARDBP-209ENST00000480464 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
TARDBP-209ENST00000480464 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
TARDBP-209ENST00000480464 POLA2Q14181 598 aa16.7■□□□□ 0.26
TARDBP-209ENST00000480464 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
TARDBP-209ENST00000480464 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-209ENST00000480464 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
TARDBP-209ENST00000480464 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
TARDBP-209ENST00000480464 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-209ENST00000480464 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
TARDBP-209ENST00000480464 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
TARDBP-209ENST00000480464 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
TARDBP-209ENST00000480464 HAX1O00165 279 aa16.13■□□□□ 0.17
TARDBP-209ENST00000480464 ZBTB22O15209 634 aa16.12■□□□□ 0.17
TARDBP-209ENST00000480464 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-209ENST00000480464 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
TARDBP-209ENST00000480464 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
TARDBP-209ENST00000480464 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
TARDBP-209ENST00000480464 FBLN2P98095 1184 aa15.87■□□□□ 0.13
TARDBP-209ENST00000480464 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
TARDBP-209ENST00000480464 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
TARDBP-209ENST00000480464 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
TARDBP-209ENST00000480464 EVX2Q03828 476 aa15.81■□□□□ 0.12
TARDBP-209ENST00000480464 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
TARDBP-209ENST00000480464 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
TARDBP-209ENST00000480464 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
TARDBP-209ENST00000480464 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
TARDBP-209ENST00000480464 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
TARDBP-209ENST00000480464 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
TARDBP-209ENST00000480464 LHX8Q68G74 356 aa15.53■□□□□ 0.08
TARDBP-209ENST00000480464 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
TARDBP-209ENST00000480464 GABBR2O75899 941 aa15.44■□□□□ 0.06
TARDBP-209ENST00000480464 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
TARDBP-209ENST00000480464 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
TARDBP-209ENST00000480464 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
TARDBP-209ENST00000480464 PLSCR2Q9NRY7 297 aa15.23■□□□□ 0.03
TARDBP-209ENST00000480464 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
TARDBP-209ENST00000480464 POTEIP0CG38 1075 aa15.08■□□□□ 0
TARDBP-209ENST00000480464 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
TARDBP-209ENST00000480464 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
TARDBP-209ENST00000480464 CLCN6P51797 869 aa14.96□□□□□ -0.01
TARDBP-209ENST00000480464 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
TARDBP-209ENST00000480464 DCBLD2Q96PD2 775 aa14.89□□□□□ -0.03
TARDBP-209ENST00000480464 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
TARDBP-209ENST00000480464 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
TARDBP-209ENST00000480464 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
TARDBP-209ENST00000480464 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
TARDBP-209ENST00000480464 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
TARDBP-209ENST00000480464 OTUD5Q96G74 571 aa14.69□□□□□ -0.06
TARDBP-209ENST00000480464 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
TARDBP-209ENST00000480464 POTEMA6NI47 508 aa14.66□□□□□ -0.06
TARDBP-209ENST00000480464 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
TARDBP-209ENST00000480464 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
TARDBP-209ENST00000480464 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
TARDBP-209ENST00000480464 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
TARDBP-209ENST00000480464 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
TARDBP-209ENST00000480464 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
TARDBP-209ENST00000480464 PCDH10Q9P2E7 1040 aa14.49□□□□□ -0.09
TARDBP-209ENST00000480464 PROM2Q8N271 834 aa14.36□□□□□ -0.11
TARDBP-209ENST00000480464 PELP1Q8IZL8 1130 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms